INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MK791318 | Escherichia phage Lilledu | 5484 | 47.210 | Escherichia | Group II | Unclassified | Unclassified | Unclassified | Unclassified | Bullavirales | Microviricetes | Phixviricota | Sangervirae | Floreoviria | Escherichia coli K-12, MG1655 | High-quality | High-quality | 99.390 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | unknown | |
| MK792752 | Listeria phage vB-LmoM-SH3-3 | 136801 | 36.044 | Listeria | Group I | Pecentumvirus | Pecentumvirus | Jasinskavirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Listeria monocytogenes | High-quality | High-quality | 99.110 | AAI-based (high-confidence) | Pecentumvirus | Pecentumvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK795384 | Vibrio phage VAP7 | 144685 | 41.864 | Vibrio | Group I | Vapseptimavirus | Vapseptimavirus | Unclassified | Ackermannviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 98.640 | AAI-based (high-confidence) | Vapseptimavirus | Vapseptimavirus VAP7 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK795385 | Klebsiella phage IME304 | 40746 | 52.393 | Klebsiella | Group I | Przondovirus | Przondovirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae 1183 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Przondovirus | Przondovirus IME205 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK796244 | Vibrio phage Achelous | 121089 | 40.036 | Vibrio | Group I | Thalassavirus | Thalassavirus | Ermolyevavirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio campbellii BB120 | Complete | High-quality | 100.000 | DTR (high-confidence) | Thalassavirus | Thalassavirus achelous | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK796797 | Shewanella phage X14 | 36396 | 44.104 | Shewanella | Group I | Bocovirus | Bocovirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Shewanella inventionis KX27 | Complete | High-quality | 100.000 | DTR (high-confidence) | Bocovirus | Bocovirus X14 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK797984 | Pseudomonas phage vB_PaeM_PA5oct | 286783 | 33.329 | Pseudomonas | Group I | Wroclawvirus | Wroclawvirus | Unclassified | Arenbergviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 99.860 | AAI-based (high-confidence) | Wroclawvirus | Wroclawvirus PA5oct | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK798142 | Pantoea phage vB_PagM_AAM22 | 49744 | 48.436 | Pantoea | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pantoea agglomerans AUR | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MK798143 | Pantoea phage vB_PagM_AAM37 | 49990 | 52.048 | Pantoea | Group I | Dibbivirus | Dibbivirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pantoea agglomerans AUR | High-quality | High-quality | 99.980 | AAI-based (high-confidence) | Dibbivirus | Dibbivirus AAM37 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK798144 | Pantoea phage vB_PagM_PSKM | 49935 | 52.356 | Pantoea | Group I | Dibbivirus | Dibbivirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pantoea agglomerans ARC | High-quality | High-quality | 99.860 | AAI-based (high-confidence) | Dibbivirus | Dibbivirus PSKM | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic |