Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MK673511Salmonella phage ZCSE25396545.843SalmonellaGroup I LoughboroughvirusLoughboroughvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar Enteritidis WT (Platten)High-qualityHigh-quality100.000AAI-based (high-confidence) LoughboroughvirusLoughboroughvirus ZCSE2The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MK675901Shewanella phage S01126228644.700ShewanellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Shewanella indicaCompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MK685667Klebsiella phage vB_KpnM_IME3464948249.052KlebsiellaGroup I BimevirusBimevirusJameshumphriesvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) BimevirusBimevirus IME346The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateantirepressor orf_47
MK685668Shigella phage VB_Ship_A74005848.405ShigellaGroup I BerlinvirusBerlinvirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Shigella flexneri A7CompleteHigh-quality100.000DTR (high-confidence) BerlinvirusBerlinvirus A7Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MK686068Streptomyces phage RemusLoopin4137662.005StreptomycesGroup I SebastisaurusvirusSebastisaurusvirusUnclassifiedColingsworthviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptomyces mirabilis NRRL B-2400High-qualityHigh-quality99.910AAI-based (high-confidence) SebastisaurusvirusSebastisaurusvirus remusloopinCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MK686069Streptomyces phage Heather4123862.845StreptomycesGroup I SebastisaurusvirusSebastisaurusvirusUnclassifiedColingsworthviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptomyces mirabilis NRRL B-2400High-qualityHigh-quality99.500AAI-based (high-confidence) SebastisaurusvirusSebastisaurusvirus heatherCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MK686071Streptomyces phage Mischief196843068.451StreptomycesGroup I WoodruffvirusWoodruffvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptomyces mirabilis NRRL B-2400High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MK689364Edwardsiella phage pEt-SU27673443.173EdwardsiellaGroup I PetsuvirusPetsuvirusUnclassifiedChimalliviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Edwardsiella tarda ATCC 15941CompleteHigh-quality100.000ITR (high-confidence) PetsuvirusPetsuvirus pEtSUCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MK693005Klebsiella phage KPR24406753.743KlebsiellaGroup I DrulisvirusDrulisvirusSlopekvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) DrulisvirusDrulisvirus KPR2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MK693030Enterococcus phage vB_EfaM_Ef2.114093835.872EnterococcusGroup I KochikohdavirusKochikohdavirusBrockvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterococcus faecalis strain AH2CompleteHigh-quality100.000DTR (high-confidence) KochikohdavirusKochikohdavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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