INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MK578530	Salmonella phage vB_SenS_SB3	41147	50.009	Salmonella	Group I	Jerseyvirus	Jerseyvirus	Guernseyvirinae	Sarkviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Enteritidis	High-quality	High-quality	96.030	AAI-based (high-confidence)	Jerseyvirus	Jerseyvirus SB3	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK580972	Stenotrophomonas phage YB07	159862	54.128	Stenotrophomonas	Group I	Menderavirus	Menderavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Stenotrophomonas maltophilia	Complete	High-quality	100.000	DTR (high-confidence)	Menderavirus	Menderavirus IMESM1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK584893	Staphylococcus phage vBSM-A1	140654	30.325	Staphylococcus	Group I	Kayvirus	Kayvirus	Twortvirinae	Herelleviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Staphylococcus aureus	High-quality	High-quality	99.330	AAI-based (high-confidence)	Kayvirus	Kayvirus G1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK598851	Escherichia phage Minorna	43264	51.456	Escherichia	Group I	Drulisvirus	Drulisvirus	Slopekvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	98.680	AAI-based (high-confidence)	Drulisvirus	Drulisvirus minorna	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK599315	Pseudomonas phage PA1C	304671	43.626	Pseudomonas	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa	High-quality	High-quality	100.000	AAI-based (high-confidence)	Pawinskivirus	Pawinskivirus PS119XW	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK599416	Salmonella phage Akira	45367	46.022	Salmonella	Group I	Akiravirus	Akiravirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica servar Enteritidis PT1	High-quality	High-quality	96.870	AAI-based (high-confidence)	Akiravirus	Akiravirus akira	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MK605242	Nodularia phage vB_NspS-kac65v151	146618	40.310	Nodularia	Group I	Ravarandavirus	Ravarandavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Nodularia spumigena KAC65	High-quality	High-quality	100.000	AAI-based (high-confidence)	Ravarandavirus	Ravarandavirus kac65v151	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	cro orf_83
MK605243	Nodularia phage vB_NspS-kac65v161	146735	40.311	Nodularia	Group I	Ravarandavirus	Ravarandavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Nodularia spumigena KAC65	High-quality	High-quality	100.000	AAI-based (high-confidence)	Ravarandavirus	Ravarandavirus kac65v151	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	cro orf_82
MK605244	Nodularia phage vB_NspS-kac65v162	147033	40.292	Nodularia	Group I	Ravarandavirus	Ravarandavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Nodularia spumigena KAC65	High-quality	High-quality	100.000	AAI-based (high-confidence)	Ravarandavirus	Ravarandavirus kac65v151	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	cro orf_82
MK605245	Nodularia phage vB_NspS-kac68v161	145400	40.235	Nodularia	Group I	Ravarandavirus	Ravarandavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Nodularia spumigena kac68	High-quality	High-quality	100.000	AAI-based (high-confidence)	Ravarandavirus	Ravarandavirus kac68v161	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	cro orf_83