Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MK552141Burkholderia phage BcepSauron26265358.097BurkholderiaGroup I SarumanvirusSarumanvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Burkholderia cenocepaciaHigh-qualityHigh-quality99.590AAI-based (high-confidence) SarumanvirusSarumanvirus bcepsauronCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MK552327Pseudomonas phage Psa2130526043.147PseudomonasGroup I TepukevirusTepukevirusUnclassifiedChimalliviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas syringae actinidaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) TepukevirusTepukevirus Psa21Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MK554696Fusobacterium phage Fnu113091424.950FusobacteriumGroup I LatrobevirusLatrobevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Fusobacterium nucleatum ATCC 10953High-qualityHigh-quality100.000AAI-based (high-confidence) LatrobevirusLatrobevirus FNU1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_60;antirepressor orf_130;antirepressor orf_177
MK557849Caudovirales GX15bay5201263.416UnspecifiedGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedLow-qualityGenome-fragment30.740HMM-based (lower-bound) New_genusNew_speciesNo hits were found with the default settingslytic
MK559428Mycobacterium phage Elephantoon5297562.748MycobacteriumGroup I FromanvirusFromanvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.770AAI-based (high-confidence) FromanvirusFromanvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateparA orf_31;immunity orf_71
MK559429Mycobacterium phage Moldemort7524063.032MycobacteriumGroup I KostyavirusKostyavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.840AAI-based (high-confidence) KostyavirusKostyavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_54;immunity orf_57
MK559459Vibrio phage vB_VcaS_HC8156647.559VibrioGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio campbellii 20150730018-1High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MK560763Virgibacillus phage Mimir874801636.859VirgibacillusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Virgibacillus halotoleransMedium-qualityGenome-fragment74.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_23;antirepressor orf_51
MK562502Shigella phage KPS649022739.045ShigellaGroup I MooglevirusMooglevirusOunavirinaeAndersonviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Shigella flexneriHigh-qualityHigh-quality100.000AAI-based (high-confidence) MooglevirusMooglevirus Sf17The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MK562503Shigella phage HRP294363054.082ShigellaGroup I BucovirusBucovirusSlopekvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Shigella flexneriCompleteHigh-quality100.000DTR (high-confidence) BucovirusBucovirus bucoCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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