Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MK524495Rhodococcus phage Belenaria4653858.591RhodococcusGroup I RerduovirusRerduovirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhodococcus erythropolis RIA 643High-qualityHigh-quality98.900AAI-based (high-confidence) RerduovirusRerduovirus RER2The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_25;immunity orf_52
MK524496Mycobacterium phage Veracruz5006264.049MycobacteriumGroup I VeracruzvirusVeracruzvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) VeracruzvirusVeracruzvirus veracruzCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_29;immunity orf_63
MK524497Mycobacterium phage Francis475393663.564MycobacteriumGroup I FromanvirusFromanvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) FromanvirusFromanvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_36;immunity orf_71
MK524499Mycobacterium phage Tripl3t5356563.689MycobacteriumGroup I FromanvirusFromanvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) FromanvirusFromanvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_37;immunity orf_74
MK524500Mycobacterium phage Kevin14198866.231MycobacteriumGroup I CharlievirusCharlievirusNclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.340AAI-based (high-confidence) CharlievirusCharlievirus Kevin1The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_33;immunity orf_34
MK524501Gordonia phage BrutonGaster9151061.480GordoniaGroup I OneupvirusOneupvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae 3612High-qualityHigh-quality99.070AAI-based (high-confidence) OneupvirusOneupvirus brutongasterThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_60
MK524502Microbacterium phage TimoTea1742768.709MicrobacteriumGroup I PaopuvirusPaopuvirusPelczarvirinaeOrlajensenviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microbacterium foliorum NRRL B-24224 SEAHigh-qualityHigh-quality100.000AAI-based (high-confidence) PaopuvirusPaopuvirus ScamanderCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MK524503Mycobacterium phage Fancypants6022861.085MycobacteriumGroup I CheoctovirusCheoctovirusGracegardnervirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) CheoctovirusCheoctovirus fancypantsThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_41;immunity orf_43;antirepressor orf_45
MK524504Mycobacterium phage Hughesyang11288460.948MycobacteriumGroup I OmegavirusOmegavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) OmegavirusOmegavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_78;immunity orf_91
MK524506Mycobacterium phage Zeuska5359863.736MycobacteriumGroup I FromanvirusFromanvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) FromanvirusFromanvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_37;immunity orf_73
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