INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MK450434	Mycobacterium phage DrPhinkDaddy	156574	64.678	Mycobacterium	Group I	Bixzunavirus	Bixzunavirus	Ceeclamvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	98.140	AAI-based (high-confidence)	Bixzunavirus	Bixzunavirus quasimodo	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK450435	Gordonia phage Hello	73453	59.188	Gordonia	Group I	Woesvirus	Woesvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	Complete	High-quality	100.000	DTR (high-confidence)	Woesvirus	Woesvirus woes	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK450436	Gordonia phage Neoevie	73353	59.124	Gordonia	Group I	Woesvirus	Woesvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	Complete	High-quality	100.000	DTR (high-confidence)	Woesvirus	Woesvirus woes	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK450538	Staphylococcus phage vB_SpsS_QT1	43029	36.882	Staphylococcus	Group I	Fibralongavirus	Fibralongavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Staphylococcus pseudintermedius 625	High-quality	High-quality	96.630	AAI-based (high-confidence)	Fibralongavirus	Fibralongavirus QT1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_26
MK450543	Natrialba phage PhiCh1	58487	61.898	Natrialba	Group I	Myohalovirus	Myohalovirus	Unclassified	Vertoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Natrialba magadii ATCC 43099	High-quality	High-quality	99.980	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
MK455769	Aeromonas phage MJG	45057	50.105	Aeromonas	Group I	Daolivirus	Daolivirus	Colwellvirinae	Autosignataviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Aeromonas hydrophila	High-quality	High-quality	97.960	AAI-based (high-confidence)	Daolivirus	Daolivirus MJG	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK455770	Aeromonas phage HJG	44965	50.268	Aeromonas	Group I	Colwellvirinae	Unclassified	Colwellvirinae	Autosignataviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Aeromonas hydrophila	Complete	High-quality	100.000	DTR (high-confidence)	Daolivirus	Daolivirus MJG	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK460245	Streptomyces phage BartholomewSD	52131	67.576	Streptomyces	Group I	Caelumvirus	Caelumvirus	Arquatrovirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces platensis MJ1A1	High-quality	High-quality	100.000	AAI-based (high-confidence)	Caelumvirus	Caelumvirus alvy	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	immunity orf_28;integrase orf_52
MK460246	Mycobacterium phage Nibb	62293	67.565	Mycobacterium	Group I	Anayavirus	Anayavirus	Weiservirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	100.000	AAI-based (high-confidence)	Anayavirus	Anayavirus nibb	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_42;immunity orf_44;cro orf_45
MK460247	Mycobacterium phage YoureAdopted	59504	66.554	Mycobacterium	Group I	Anayavirus	Anayavirus	Weiservirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	97.230	AAI-based (high-confidence)	Anayavirus	Anayavirus beezoo	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_40;immunity orf_42