Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MK449006Streptococcus phage Javan783649337.818StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus anginosus SK1138High-qualityHigh-quality98.150AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
MK449007Streptococcus phage Javan83446443.782StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus agalactiae A909Medium-qualityGenome-fragment76.720AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MK449008Streptococcus phage Javan844357241.210StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus azizii 1206367High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_1;cro orf_12
MK449009Streptococcus phage Javan884004738.293StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus canis ERR438797High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_1;integrase orf_3
MK449010Streptococcus phage Javan903702938.572StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus canis ERR438798High-qualityHigh-quality92.460AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_1;antirepressor orf_7
MK449011Streptococcus phage Javan923755443.543StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus canis ERR438806Medium-qualityGenome-fragment82.930AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_41
MK449012Streptococcus phage Javan943429338.757StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus canis FSL_Z3-227High-qualityHigh-quality98.060AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MK450421Streptomyces phage Vash4157862.485StreptomycesGroup I VashvirusVashvirusUnclassifiedColingsworthviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptomyces griseus ATCC 10137High-qualityHigh-quality100.000AAI-based (high-confidence) VashvirusVashvirus vashThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_50
MK450422Mycobacterium phage RoMag15631964.713MycobacteriumGroup I BixzunavirusBixzunavirusCeeclamvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality97.980AAI-based (high-confidence) BixzunavirusBixzunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MK450423Mycobacterium phage Stubby15336964.715MycobacteriumGroup I BixzunavirusBixzunavirusCeeclamvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality96.130AAI-based (high-confidence) BixzunavirusBixzunavirus aliceCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateimmunity orf_40
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