Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MK448976Streptococcus phage Javan5283738139.442StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus pyogenes NZ131High-qualityHigh-quality94.240AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_1;cro orf_4
MK448977Streptococcus phage Javan5304151238.627StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus pyogenes SSI-1High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_1;antirepressor orf_6
MK448978Streptococcus phage Javan5323958737.707StreptococcusGroup I TrabyvirinaeUnclassifiedTrabyvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus pyogenes SSI-1High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_1;cro orf_4;antirepressor orf_8;immunity orf_22;integrase orf_25
MK448979Streptococcus phage Javan5343988842.429StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus salivarius ATCC_7073High-qualityHigh-quality99.470AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_1;cro orf_6
MK448980Streptococcus phage Javan5364079841.509StreptococcusGroup I AliceevansviridaeUnclassifiedUnclassifiedAliceevansviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus salivarius JIM8777High-qualityHigh-quality96.380AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_1;antirepressor orf_9
MK448981Streptococcus phage Javan5483277341.842StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus suis 8067High-qualityHigh-quality94.980AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_1;cro orf_6
MK448982Streptococcus phage Javan5543712740.782StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus suis 89-3576-3High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_1
MK448983Streptococcus phage Javan5583989841.142StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus suis D12_PRJNA65469Medium-qualityGenome-fragment80.910AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_45
MK448984Streptococcus phage Javan5623542240.540StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus suis ERR120115High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_1
MK448985Streptococcus phage Javan5663604440.756StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus suis ERR120214High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_1;cro orf_8
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