INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PZ233471 | Klebsiella phage Atkp007 | 114959 | 45.100 | Klebsiella | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Klebsiella pneumoniae LabMCT0682 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Sugarlandvirus | Sugarlandvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PZ233470 | Klebsiella phage Atkp006 | 110626 | 45.263 | Klebsiella | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Klebsiella pneumoniae LabMCT0682 | High-quality | High-quality | 97.140 | AAI-based (high-confidence) | Sugarlandvirus | Sugarlandvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PZ233469 | Klebsiella phage Atkp004 | 52495 | 49.176 | Klebsiella | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Klebsiella pneumoniae LabMCT0682 | High-quality | High-quality | 99.380 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PZ233468 | Klebsiella phage Atkp001 | 49128 | 52.007 | Klebsiella | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Klebsiella pneumoniae LabMCT0682 | High-quality | High-quality | 98.120 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PZ233467 | Acinetobacter phage Atab004 | 42634 | 40.400 | Acinetobacter | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Acinetobacter baumannii LUH12247 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PZ233466 | Acinetobacter phage Atab003 | 41779 | 41.164 | Acinetobacter | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Acinetobacter baumannii LUH12247 | High-quality | High-quality | 98.320 | AAI-based (high-confidence) | Daemvirus | Daemvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PZ233465 | Acinetobacter phage Atab002 | 168707 | 34.533 | Acinetobacter | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Acinetobacter baumannii LUH12247 | High-quality | High-quality | 99.740 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PZ233464 | Acinetobacter phage Atab001 | 167085 | 36.334 | Acinetobacter | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Acinetobacter baumannii LUH12247 | High-quality | High-quality | 99.470 | AAI-based (high-confidence) | Hadassahvirus | Hadassahvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PZ233463 | Pseudomonas phage Qatpa009 | 58375 | 60.168 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa PAV237 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Maxdohrnvirus | Maxdohrnvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_84 |
| PZ233462 | Pseudomonas phage Qatpa008 | 63025 | 55.833 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa PAV237 | Complete | High-quality | 100.000 | DTR (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic |