INPHARED2 - BMCPR

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
PP034388	Staphylococcus phage CF7	138217	30.986	Staphylococcus	Group I	Twortvirinae	Unclassified	Twortvirinae	Herelleviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Staphylococcus succinis PJI isolate 7	High-quality	High-quality	97.650	AAI-based (high-confidence)	Kayvirus	Kayvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP034387	Staphylococcus phage CF1	96354	29.296	Staphylococcus	Group I	Sextaecvirus	Sextaecvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Staphylococcus epidermidis PJI isolate 1	High-quality	High-quality	100.000	AAI-based (high-confidence)	Sextaecvirus	Sextaecvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_40
PP034127	Salmonella phage L223	44321	49.690	Salmonella	Group I	Jerseyvirus	Jerseyvirus	Guernseyvirinae	Sarkviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Typhimurium	Complete	High-quality	100.000	DTR (high-confidence)	Jerseyvirus	Jerseyvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP028463	Enterococcus phage EF_RCK	57853	39.910	Enterococcus	Group I	Saphexavirus	Saphexavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterococcus faecalis ATCC 29212	High-quality	High-quality	100.000	AAI-based (high-confidence)	Saphexavirus	Saphexavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP027964	Vibrio phage VpP_43	93814	45.137	Vibrio	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Vibrio parahaemolyticus	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	lytic
PP003923	Pseudomonas phage vB_Pae_U11	39029	63.127	Pseudomonas	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Pseudomonas aeruginosa ST773 (NDM-1-producing)	High-quality	High-quality	99.430	AAI-based (high-confidence)	Mechnikovvirus	Mechnikovvirus PM105	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP003922	Pseudomonas phage vB_Pae_U10	10183	61.171	Pseudomonas	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Pseudomonas aeruginosa ST773 (NDM-1-producing)	Low-quality	Genome-fragment	22.400	HMM-based (lower-bound)	New_genus	New_species	No hits were found with the default settings	lytic
PP003921	Pseudomonas phage vB_Pae_U9	49733	59.367	Pseudomonas	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Pseudomonas aeruginosa ST773 (NDM-1-producing)	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_82
PP003920	Pseudomonas phage vB_Pae_U8	41111	62.630	Pseudomonas	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Pseudomonas aeruginosa ST773 (NDM-1-producing)	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	temperate	cro orf_14
PP003919	Pseudomonas phage vB_Pae_U7	57842	58.931	Pseudomonas	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Pseudomonas aeruginosa ST773 (NDM-1-producing)	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_1;cro orf_35