Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Clear
Choose fields for download

36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PP316168Ralstonia phage RS-AB14166864.296RalstoniaGroup I AcarajevirusAcarajevirusUnclassifiedPeduoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Ralstonia solanacearum and Ralstonia pseudosolanacearumCompleteHigh-quality100.000DTR (high-confidence) AcarajevirusAcarajevirus bahiaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_1
PP314354Leeuwenhoekiella phage vB_LaeS_Arctus_14266634.911LeeuwenhoekiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Leeuwenhoekiella aequorea Arc30Low-qualityGenome-fragment48.410HMM-based (lower-bound) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_76
PP314035Pseudomonas phage ISPAA976590655.003PseudomonasGroup I PbunavirusPbunavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaHigh-qualityHigh-quality99.780AAI-based (high-confidence) PbunavirusPbunavirus R26Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP314034Staphylococcus phage IMMEA974328826.204StaphylococcusGroup I PhietavirusPhietavirusAzeredovirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureusHigh-qualityHigh-quality100.000AAI-based (high-confidence) PhietavirusPhietavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_1
PP313117Xanthomonas phage Kintu4898551.706XanthomonasGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Xanthomonas vasicola pv. musacearum Xvm9-7High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PP312928Klebsiella phage vB_KpnM_W15-215370039.546KlebsiellaGroup I JiaodavirusJiaodavirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae ATCC 13883CompleteHigh-quality100.000DTR (high-confidence) JiaodavirusJiaodavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP312927Klebsiella phage vB_KpnM_W14-416797939.516KlebsiellaGroup I JiaodavirusJiaodavirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae ATCC 13883High-qualityHigh-quality99.540AAI-based (high-confidence) JiaodavirusJiaodavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP301343Escherichia phage UE-M67611042.894EscherichiaGroup I GamaleyavirusGamaleyavirusEnquatrovirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli UPECCompleteHigh-quality100.000DTR (high-confidence) GamaleyavirusGamaleyavirus Ues5aCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP301342Escherichia phage UE-M37372842.992EscherichiaGroup I GamaleyavirusGamaleyavirusEnquatrovirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli UPECCompleteHigh-quality100.000DTR (high-confidence) GamaleyavirusGamaleyavirus Ues5aCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP301341Escherichia phage UE-S5b7376642.953EscherichiaGroup I GamaleyavirusGamaleyavirusEnquatrovirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli UPECCompleteHigh-quality100.000DTR (high-confidence) GamaleyavirusGamaleyavirus Ues5aCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
Previous Page 691 of 3635 Next