Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PP357459Klebsiella phage 1750094042253.132KlebsiellaGroup I PrzondovirusPrzondovirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae 135080CompleteHigh-quality100.000DTR (high-confidence) PrzondovirusPrzondovirus pv066037Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP357457Klebsiella phage 1750073919153.262KlebsiellaGroup I PrzondovirusPrzondovirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae 135080CompleteHigh-quality100.000DTR (high-confidence) PrzondovirusPrzondovirus pv175007Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP357456Klebsiella phage 1750064008653.009KlebsiellaGroup I PrzondovirusPrzondovirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae 135080High-qualityHigh-quality99.920AAI-based (high-confidence) PrzondovirusPrzondovirus pv175006Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP357455Klebsiella phage 1750054014353.155KlebsiellaGroup I PrzondovirusPrzondovirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae 135080CompleteHigh-quality100.000DTR (high-confidence) PrzondovirusPrzondovirus pv175005Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP357454Klebsiella phage 1750044162352.699KlebsiellaGroup I PrzondovirusPrzondovirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae 135080CompleteHigh-quality100.000DTR (high-confidence) PrzondovirusPrzondovirus pv150004Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP357453Klebsiella phage 1750033963052.937KlebsiellaGroup I PrzondovirusPrzondovirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae 135080CompleteHigh-quality100.000DTR (high-confidence) PrzondovirusPrzondovirus pv175003Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP357452Klebsiella phage 1750024081653.070KlebsiellaGroup I PrzondovirusPrzondovirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae 135080High-qualityHigh-quality100.000AAI-based (high-confidence) BenllochvirusBenllochvirus cmc355DCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP356685Erwinia phage phiEF23942250.644ErwiniaGroup I TeetrevirusTeetrevirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Erwinia amylovora CECT 222CompleteHigh-quality100.000DTR (high-confidence) TeetrevirusTeetrevirus EF2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PP355976Acinetobacter phage vB_AbaM_YNAF4567937.619AcinetobacterGroup I PolandvirusPolandvirusUnclassifiedHirszfeldviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumannii ST2High-qualityHigh-quality100.000AAI-based (high-confidence) PolandvirusPolandvirus YNAFThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateantirepressor orf_43
PP355768Klebsiella phage vB_Kpn_AM_K626104441.865KlebsiellaGroup I StraboviridaeUnclassifiedUnclassifiedStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae ATCC 33495High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
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