INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Create interactive summaries of genome metadata and download the resulting figures.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle
PP412820	Enterobacteria phage PRDazure	14869	48.161	Enterobacteria	Group I	Alphatectivirus	Alphatectivirus	Unclassified	Tectiviridae	Kalamavirales	Tectiliviricetes	Preplasmiviricota	Bamfordvirae	Varidnaviria	Salmonella enterica serovar Typhimurium LT2 - pKJK5	Complete	High-quality	100.000	ITR (high-confidence)	Alphatectivirus	Alphatectivirus PRD1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP412819	Enterobacteria phage PRDavocado	14742	48.406	Enterobacteria	Group I	Tectiviridae	Unclassified	Unclassified	Tectiviridae	Kalamavirales	Tectiliviricetes	Preplasmiviricota	Bamfordvirae	Varidnaviria	Salmonella enterica serovar Typhimurium LT2 - pKJK5	High-quality	High-quality	98.610	AAI-based (high-confidence)	Alphatectivirus	Alphatectivirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP412818	Enterobacteria phage PRDaubergine	14719	48.257	Enterobacteria	Group I	Alphatectivirus	Alphatectivirus	Unclassified	Tectiviridae	Kalamavirales	Tectiliviricetes	Preplasmiviricota	Bamfordvirae	Varidnaviria	Salmonella enterica serovar Typhimurium LT2 - pKJK5	High-quality	High-quality	98.460	AAI-based (high-confidence)	Alphatectivirus	Alphatectivirus PRD1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP412817	Enterobacteria phage PRDasparagus	14772	48.308	Enterobacteria	Group I	Tectiviridae	Unclassified	Unclassified	Tectiviridae	Kalamavirales	Tectiliviricetes	Preplasmiviricota	Bamfordvirae	Varidnaviria	Salmonella enterica serovar Typhimurium LT2 - pKJK5	High-quality	High-quality	98.810	AAI-based (high-confidence)	Alphatectivirus	Alphatectivirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP412816	Enterobacteria phage PRDaquamarine	14890	48.321	Enterobacteria	Group I	Tectiviridae	Unclassified	Unclassified	Tectiviridae	Kalamavirales	Tectiliviricetes	Preplasmiviricota	Bamfordvirae	Varidnaviria	Salmonella enterica serovar Typhimurium LT2 - pKJK5	High-quality	High-quality	99.600	AAI-based (high-confidence)	Alphatectivirus	Alphatectivirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP412815	Enterobacteria phage PRDamber	14733	48.184	Enterobacteria	Group I	Tectiviridae	Unclassified	Unclassified	Tectiviridae	Kalamavirales	Tectiliviricetes	Preplasmiviricota	Bamfordvirae	Varidnaviria	Salmonella enterica serovar Typhimurium LT2 - pKJK5	High-quality	High-quality	98.550	AAI-based (high-confidence)	Alphatectivirus	Alphatectivirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP410321	Escherichia phage vB_EcoM_CUA3	171331	32.819	Escherichia	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Dhakavirus	Dhakavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP408255	Pseudomonas phage vB_Pa-PAC8	65830	54.969	Pseudomonas	Group I	Pbunavirus	Pbunavirus	Unclassified	Lindbergviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa PA14	High-quality	High-quality	99.670	AAI-based (high-confidence)	Pbunavirus	Pbunavirus EPa61	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP408254	Pseudomonas phage vB_Pa-PAC7	62356	64.509	Pseudomonas	Group I	Yuavirus	Yuavirus	Rabinowitzvirinae	Mesyanzhinovviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa PA14	High-quality	High-quality	100.000	AAI-based (high-confidence)	Yuavirus	Yuavirus PAC6	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP408253	Pseudomonas phage vB_Pa-PAC6	60364	64.489	Pseudomonas	Group I	Yuavirus	Yuavirus	Rabinowitzvirinae	Mesyanzhinovviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa PA14	High-quality	High-quality	98.340	AAI-based (high-confidence)	Yuavirus	Yuavirus PAC6	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic