Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PZ347661Escherichia phage XQ-17329942.882EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coliHigh-qualityHigh-quality100.000AAI-based (high-confidence) GamaleyavirusGamaleyavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ344858Escherichia phage vB_EcoP_QH063856148.559EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coli ATCC 38006High-qualityHigh-quality96.660AAI-based (high-confidence) TeseptimavirusTeseptimavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ344458Acinetobacter phage CP-p-AB-210334099739.476AcinetobacterGroup I FriunavirusFriunavirusBeijerinckvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumanniiHigh-qualityHigh-quality98.980AAI-based (high-confidence) FriunavirusFriunavirus fv15519Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ344222Acinetobacter phage CP-p-AB-251024106639.098AcinetobacterGroup I FriunavirusFriunavirusBeijerinckvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumanniiHigh-qualityHigh-quality99.140AAI-based (high-confidence) FriunavirusFriunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ344153Klebsiella phage Phalaris15949346.253KlebsiellaGroup I TaipeivirusTaipeivirusUnclassifiedAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae K2High-qualityHigh-quality100.000AAI-based (high-confidence) TaipeivirusTaipeivirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ344143Pseudomonas phage Nyasha6595855.607PseudomonasUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Pseudomonas aeruginosa PAO 1High-qualityHigh-quality99.860AAI-based (high-confidence) PbunavirusPbunavirus KTN6Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ341934Ralstonia phage vB_RsoP_SQc26162964.948RalstoniaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Ralstonia solanacearumHigh-qualityHigh-quality100.000AAI-based (high-confidence) GervaisevirusGervaisevirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_57
PZ341933Ralstonia phage vB_RsoP_PBa14206862.442RalstoniaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Ralstonia solanacearumCompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_28
PZ340978Escherichia phage GEP664403954.656EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coli ATCC 35150CompleteHigh-quality100.000DTR (high-confidence) DhillonvirusDhillonvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ340184Vibrio phage vB_VpaP_R38Z5036841.697VibrioUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Vibrio parahaemolyticus D69_TY10Medium-qualityGenome-fragment56.810AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
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