INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Explore INPHARED2 data visually

Create interactive summaries of genome metadata and download the resulting figures.

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Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Host (NCBI)

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Genus (TaxMyPhage)

CheckV quality

PhageLeads lifestyle

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
PP738794	Klebsiella phage vB_KpnS_Holland_MM2	46433	56.632	Klebsiella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Klebsiella pneumoniae 1101160 (ATCC BAA-2342)	High-quality	High-quality	96.930	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
PP738793	Klebsiella phage vB_KpnS_Mingus_MM1	48238	57.015	Klebsiella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Klebsiella pneumoniae 1101160 (ATCC BAA-2342)	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
PP738792	Klebsiella phage vB_KpnM_SmallBear_ER8	166618	39.367	Klebsiella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Klebsiella pneumoniae 1100975 (ATCC BAA-2472)	High-quality	High-quality	98.750	AAI-based (high-confidence)	Jiaodavirus	Jiaodavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP738791	Klebsiella phage vB_KpnM_Jem_ER55	49574	50.052	Klebsiella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Klebsiella pneumoniae MH258 (clinical isolate)	High-quality	High-quality	100.000	AAI-based (high-confidence)	Webervirus	Webervirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP738790	Klebsiella phage vB_KpnM_ALF_ER54	177432	41.629	Klebsiella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Klebsiella pneumoniae MH258 (clinical isolate)	High-quality	High-quality	99.580	AAI-based (high-confidence)	Slopekvirus	Slopekvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP738789	Klebsiella phage vB_KpnM_Fraggle_ER53	175532	44.667	Klebsiella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Klebsiella pneumoniae MH258 (clinical isolate)	High-quality	High-quality	98.570	AAI-based (high-confidence)	Pseudotevenvirus	Pseudotevenvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP738788	Klebsiella phage vB_KpnS_Riker_ER52	109411	44.825	Klebsiella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Klebsiella pneumoniae MH258 (clinical isolate)	High-quality	High-quality	95.820	AAI-based (high-confidence)	Sugarlandvirus	Sugarlandvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP738787	Klebsiella phage vB_KpnM_Lychee_ER51	176230	41.724	Klebsiella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Klebsiella pneumoniae JHCK1 (BEI NR-48976)	High-quality	High-quality	98.910	AAI-based (high-confidence)	Slopekvirus	Slopekvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP738786	Klebsiella phage vB_KpnM_Kiwi_ER50	177367	41.663	Klebsiella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Klebsiella pneumoniae JHCK1 (BEI NR-48976)	High-quality	High-quality	99.550	AAI-based (high-confidence)	Slopekvirus	Slopekvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP738785	Klebsiella phage vB_KpnP_Tribble_ER49	76827	44.505	Klebsiella	Group I	Efbeekayvirus	Efbeekayvirus	Waldeevirinae	Schitoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae KPPR1 (ATCC 43816)	High-quality	High-quality	100.000	AAI-based (high-confidence)	Efbeekayvirus	Efbeekayvirus Tribbleer49	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	cro orf_62