INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Create interactive summaries of genome metadata and download the resulting figures.

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Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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Genus (TaxMyPhage)

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle
PP848838	Klebsiella phage vB_Kpn13-P3	113915	45.336	Klebsiella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Klebsiella pneumoniae Kpn13	High-quality	High-quality	99.770	AAI-based (high-confidence)	Sugarlandvirus	Sugarlandvirus VAC51	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP848837	Klebsiella phage vB_Kpn13-P2	112579	45.252	Klebsiella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Klebsiella pneumoniae Kpn13	High-quality	High-quality	98.860	AAI-based (high-confidence)	Sugarlandvirus	Sugarlandvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP848836	Klebsiella phage vB_Kpn13-P1	114371	45.350	Klebsiella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Klebsiella pneumoniae Kpn13	High-quality	High-quality	100.000	AAI-based (high-confidence)	Sugarlandvirus	Sugarlandvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP848496	Enterococcus phage vB_EfaS_SZ1	40942	34.500	Enterococcus	Group I	Efquatrovirus	Efquatrovirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterococcus faecalis (HLGR5; high level gentamycin resistance)	High-quality	High-quality	100.000	AAI-based (high-confidence)	Efquatrovirus	Efquatrovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP848412	Escherichia phage vb_EcoB_G21-7	57339	39.985	Escherichia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Escherichia coli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Saphexavirus	Saphexavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP848306	Pseudomonas phage vB_PaeM_PE1	66600	55.745	Pseudomonas	Group I	Pbunavirus	Pbunavirus	Unclassified	Lindbergviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa PAO1	Complete	High-quality	100.000	DTR (high-confidence)	Pbunavirus	Pbunavirus JG024	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP847084	Klebsiella phage KpTDp1	49311	48.517	Klebsiella	Group I	Jedunavirus	Jedunavirus	Jameshumphriesvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	Complete	High-quality	100.000	DTR (high-confidence)	Sircambvirus	Sircambvirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
PP844715	Acinetobacter phage vB_AbaM-SPA	45115	37.449	Acinetobacter	Group I	Sichuanvirus	Sichuanvirus	Unclassified	Hirszfeldviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii	High-quality	High-quality	100.000	AAI-based (high-confidence)	Sichuanvirus	Sichuanvirus SPA	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
PP841139	Acinetobacter phage vB_Ab_164_KEN_03	41168	39.212	Acinetobacter	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Acinetobacter baumannii 164	High-quality	High-quality	99.380	AAI-based (high-confidence)	Friunavirus	Friunavirus 164KEN02	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PP841138	Acinetobacter phage vB_Ab_1137_KEN_07	41054	39.236	Acinetobacter	Group I	Friunavirus	Friunavirus	Beijerinckvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii 1137	High-quality	High-quality	99.110	AAI-based (high-confidence)	Friunavirus	Friunavirus 1137KEN06	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic