Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PQ010280Escherichia phage vB_EcoM_CQ6153970948.594EscherichiaGroup I TeseptimavirusTeseptimavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli ETEC O6:K15CompleteHigh-quality100.000DTR (high-confidence) TeseptimavirusTeseptimavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ008975Pectobacterium phage Taid3994146.797PectobacteriumGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pectobacterium brasiliense 35.2High-qualityHigh-quality96.140AAI-based (high-confidence) FrederiksbergvirusFrederiksbergvirus pappousCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ008974Pectobacterium phage Sabo4216746.202PectobacteriumGroup I FrederiksbergvirusFrederiksbergvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pectobacterium brasiliense 35.2High-qualityHigh-quality100.000AAI-based (high-confidence) FrederiksbergvirusFrederiksbergvirus saboCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ008973Pectobacterium phage Pappous4085046.563PectobacteriumGroup I FrederiksbergvirusFrederiksbergvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pectobacterium brasiliense 35.2High-qualityHigh-quality98.330AAI-based (high-confidence) FrederiksbergvirusFrederiksbergvirus pappousCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ008972Pectobacterium phage Koroua4134646.442PectobacteriumGroup I FrederiksbergvirusFrederiksbergvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pectobacterium brasiliense 35.2High-qualityHigh-quality99.520AAI-based (high-confidence) FrederiksbergvirusFrederiksbergvirus korouaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ008971Pectobacterium phage Amona4220646.330PectobacteriumGroup I FrederiksbergvirusFrederiksbergvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pectobacterium brasiliense 35.2High-qualityHigh-quality100.000AAI-based (high-confidence) FrederiksbergvirusFrederiksbergvirus amonaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ002172Salmonella phage vB_Sen_SG_WM_SEW_94171549.848SalmonellaGroup I MesyanzhinovviridaeUnclassifiedUnclassifiedMesyanzhinovviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar EnteritidisCompleteHigh-quality100.000DTR (high-confidence) JerseyvirusJerseyvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PQ002171Salmonella phage vB_Sen_SG_WM_SEW_6S14209945.787SalmonellaGroup I DemerecviridaeUnclassifiedUnclassifiedDemerecviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar EnteritidisCompleteHigh-quality100.000DTR (high-confidence) SeunavirusSeunavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PQ002170Salmonella phage vB_Sen_SG_WM_RUS_R714200845.788SalmonellaGroup I DemerecviridaeUnclassifiedUnclassifiedDemerecviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar EnteritidisCompleteHigh-quality100.000DTR (high-confidence) SeunavirusSeunavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PQ002169Salmonella phage vB_Sen_SG_WM_RUS_R210255338.835SalmonellaGroup I DemerecviridaeUnclassifiedUnclassifiedDemerecviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar EnteritidisCompleteHigh-quality100.000DTR (high-confidence) TequintavirusTequintavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
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