INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PZ748803 | Pseudomonas phage ADSPa5 | 40265 | 52.219 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa | Medium-quality | Genome-fragment | 88.790 | AAI-based (high-confidence) | lytic | ||||
| PZ748802 | Pseudomonas phage ADSPa3 | 36997 | 63.065 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| PZ748801 | Pseudomonas phage ADSPa1 | 63025 | 55.835 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| PZ748693 | Listeria phage LPC_P24 | 39955 | 37.054 | Listeria | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Listeria sp. | High-quality | High-quality | 98.790 | AAI-based (high-confidence) | Aquingentivirus | Aquingentivirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | integrase orf_47;cro orf_51;antirepressor orf_53 |
| PZ748594 | Escherichia phage vB_EcoS-TP26lw | 61890 | 43.448 | Escherichia | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Escherichia coli O26 (Shiga toxin-producing) | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Nonagvirus | Nonagvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PZ745947 | Pseudomonas phage PA73P | 52839 | 63.008 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa | Complete | High-quality | 100.000 | DTR (high-confidence) | New_genus | New_species | Query is a new genus and species. You could try running again with if you larger distance | temperate | integrase orf_19 |
| PZ745946 | Pseudomonas phage PA66P | 62920 | 63.242 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa | High-quality | High-quality | 97.780 | AAI-based (high-confidence) | Hollowayvirus | Hollowayvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_31 |
| PZ744780 | Microbacterium phage WheelerS25 | 61980 | 66.914 | Microbacterium | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Microbacterium foliorum NRRL B-24224 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| PZ744779 | Streptomyces phage WashU | 133222 | 50.041 | Streptomyces | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Streptomyces lividans JI 1326 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| PZ744778 | Arthrobacter phage ToastyOats | 42487 | 64.796 | Arthrobacter | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Arthrobacter globiformis B-2979 | High-quality | High-quality | 99.980 | AAI-based (high-confidence) | temperate | integrase orf_37 |