INPHARED2 - BMCPR

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Create interactive summaries of genome metadata and download the resulting figures.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
PQ785851	Escherichia phage JNP1	40865	44.082	Escherichia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Escherichia coli Top10 and MG1655	Complete	High-quality	100.000	DTR (medium-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	lytic
PQ785585	Salmonella phage As4	59598	56.512	Salmonella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Salmonella enterica subsp. enterica serovar Typhimurium	High-quality	High-quality	92.240	AAI-based (high-confidence)	Chivirus	Chivirus chi	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PQ785584	Salmonella phage As4	31998	56.963	Salmonella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Salmonella enterica subsp. enterica serovar Typhimurium	Low-quality	Genome-fragment	48.800	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	lytic
PQ785583	Salmonella phage As2	72939	39.478	Salmonella	Group I	Ithacavirus	Ithacavirus	Humphriesvirinae	Schitoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Typhimurium	Complete	High-quality	100.000	DTR (high-confidence)	Ithacavirus	Ithacavirus As2	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PQ783785	Escherichia phage PDP46	56522	43.682	Escherichia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Escherichia coli HS(pFamp)R (ATCC 700891)	High-quality	High-quality	99.330	AAI-based (high-confidence)	Sashavirus	Sashavirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
PQ782953	Riemerella phage vB_RanS_CRP34	47787	34.905	Riemerella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Riemerella anatipestifer RAf8	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	temperate	antirepressor orf_20;antirepressor orf_74
PQ778307	Enterococcus phage SSBHU	43953	35.310	Enterococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Enterococcus faecium ATCC 35667	Complete	High-quality	100.000	DTR (high-confidence)	Efemquintavirus	Efemquintavirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
PQ777470	Staphylococcus phage SPB	143170	30.205	Staphylococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Staphylococcus aureus (MRSA)	Complete	High-quality	100.000	DTR (high-confidence)	Kayvirus	Kayvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PQ773600	Corynebacterium phage CPphiVTCCBPA_418	41325	40.629	Corynebacterium	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Corynebacterium pseudotuberculosis	Low-quality	Genome-fragment	36.510	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	lytic
PQ768829	Vibrio phage Morian	125943	40.070	Vibrio	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Vibrio campbellii BB120	Complete	High-quality	100.000	DTR (high-confidence)	Thalassavirus	Thalassavirus bennett	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic