INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle
PV648988	Enterobacter phage DJEDI_07	44487	52.035	Enterobacter	Group I	Koutsourovirus	Koutsourovirus	Slopekvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterobacter cloacae BOJ39	High-quality	High-quality	100.000	AAI-based (high-confidence)	Koutsourovirus	Koutsourovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PV648987	Enterobacter phage ISKB_CR35	44426	52.064	Enterobacter	Group I	Koutsourovirus	Koutsourovirus	Slopekvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterobacter cloacae BOJ39	High-quality	High-quality	100.000	AAI-based (high-confidence)	Koutsourovirus	Koutsourovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PV648986	Enterobacter phage MPCR_35	64420	45.430	Enterobacter	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Enterobacter cloacae BOJ39	Medium-quality	Genome-fragment	77.550	AAI-based (medium-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
PV648985	Enterobacter phage Djazair_36	62169	54.696	Enterobacter	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Enterobacter cloacae BOJ39	High-quality	High-quality	100.000	AAI-based (medium-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
PV648984	Enterobacter phage ISKB_SR15	43978	52.001	Enterobacter	Group I	Koutsourovirus	Koutsourovirus	Slopekvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterobacter cloacae BOJ39	High-quality	High-quality	100.000	AAI-based (high-confidence)	Koutsourovirus	Koutsourovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PV648983	Enterobacter phage ISKB_ChR05	44058	52.004	Enterobacter	Group I	Koutsourovirus	Koutsourovirus	Slopekvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterobacter cloacae BOJ39	High-quality	High-quality	100.000	AAI-based (high-confidence)	Koutsourovirus	Koutsourovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PV648982	Enterobacter phage ISKB_Badis25	44038	51.980	Enterobacter	Group I	Koutsourovirus	Koutsourovirus	Slopekvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterobacter cloacae BOJ39	High-quality	High-quality	100.000	AAI-based (high-confidence)	Koutsourovirus	Koutsourovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PV648981	Enterobacter phage ISKB_CHU25	44090	51.987	Enterobacter	Group I	Koutsourovirus	Koutsourovirus	Slopekvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterobacter cloacae BOJ39	High-quality	High-quality	100.000	AAI-based (high-confidence)	Koutsourovirus	Koutsourovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PV648980	Enterobacter phage ISKB_BR08	44521	52.007	Enterobacter	Group I	Koutsourovirus	Koutsourovirus	Slopekvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterobacter cloacae BOJ39	High-quality	High-quality	100.000	AAI-based (high-confidence)	Koutsourovirus	Koutsourovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PV648736	Enterococcus phage vB_EfaS_SZ2	42033	34.723	Enterococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Enterococcus faecalis	High-quality	High-quality	100.000	AAI-based (high-confidence)	Efquatrovirus	Efquatrovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic