Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PV759139Pseudomonas phage vB_Pae_LMQSRe25-12153464.902PseudomonasUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Pseudomonas aeruginosaMedium-qualityGenome-fragment56.170AAI-based (high-confidence) CasadabanvirusCasadabanvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV755962Klebsiella phage CP-p-Kpn-210693947453.063KlebsiellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality98.380AAI-based (high-confidence) PrzondovirusPrzondovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV755398Mycobacterium phage Lebo145823068.010MycobacteriumUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) FionnbharthvirusFionnbharthvirus fionnbharthCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_44;immunity orf_46;cro orf_47
PV755397Mycobacterium phage Ben116866867.481MycobacteriumUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.380AAI-based (high-confidence) PipefishvirusPipefishvirus athenaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV755396Mycobacterium phage Bhagsy4819567.030MycobacteriumUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.370AAI-based (high-confidence) FishburnevirusFishburnevirus ksquaredCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_31;immunity orf_32;antirepressor orf_35
PV755395Mycobacterium phage EnzoK5087363.531MycobacteriumUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality97.980AAI-based (high-confidence) FromanvirusFromanvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateimmunity orf_69
PV755394Mycobacterium phage Violac5819661.324MycobacteriumUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) CheoctovirusCheoctovirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateimmunity orf_37;integrase orf_39;immunity orf_43;antirepressor orf_45
PV755393Mycobacterium phage Kari4752367.273MycobacteriumUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality96.990AAI-based (high-confidence) FishburnevirusFishburnevirus fishburneCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_30;immunity orf_31;antirepressor orf_34
PV754127Xanthomonas phage PhiXhv-284688361.863XanthomonasUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Xanthomonas hortorum pv. vitians AB16734deltaLPS3High-qualityHigh-quality99.960AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PV754031Pseudomonas phage Bobae27838136.941PseudomonasUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Pseudomonas aeruginosa Ps33 (clinical isolate)High-qualityHigh-quality99.300AAI-based (high-confidence) PhikzvirusPhikzvirus phiKZCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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