INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PV764938 | Sinorhizobium phage Phosso | 469473 | 49.454 | Sinorhizobium | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Sinohrizobium meliloti NRRL L-50 | High-quality | High-quality | 97.760 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PV764937 | Agrobacterium phage Rivra | 44274 | 56.516 | Agrobacterium | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Agrobacterium tumefaciens EHA105 | High-quality | High-quality | 93.490 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_37 |
| PV764747 | Proteus phage PA_03 | 53046 | 38.891 | Proteus | Group I | Myducvirus | Myducvirus | Cleopatravirinae | Chaseviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Proteus mirabilis | High-quality | High-quality | 99.350 | AAI-based (high-confidence) | Myducvirus | Myducvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PV764647 | Pseudomonas phage HenuyfyN19 | 93413 | 49.425 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa 2025019N | Complete | High-quality | 100.000 | DTR (high-confidence) | Pakpunavirus | Pakpunavirus GUMS | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PV764603 | Xanthomonas phage PhiXhv-16 | 229154 | 55.087 | Xanthomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Xanthomonas hortorum pv. vitians CFBP8640 | High-quality | High-quality | 93.660 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_19;cro orf_111 |
| PV764602 | Xanthomonas phage PhiXhv-15 | 228725 | 55.174 | Xanthomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Xanthomonas hortorum pv. vitians CFBP8640 | High-quality | High-quality | 93.760 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_19;cro orf_109 |
| PV764601 | Xanthomonas phage PhiXhv-12 | 227648 | 55.114 | Xanthomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Xanthomonas hortorum pv. vitians CFBP8640 | High-quality | High-quality | 93.100 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | cro orf_217;integrase orf_307 |
| PV764600 | Xanthomonas phage PhiXhv-18 | 47821 | 61.596 | Xanthomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Xanthomonas hortorum pv. vitians CFBP8643 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PV764599 | Xanthomonas phage PhiXhv-7 | 46786 | 62.055 | Xanthomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Xanthomonas hortorum pv. vitians CFBP8641 | High-quality | High-quality | 99.770 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PV764598 | Xanthomonas phage PhiXhv-5 | 47720 | 61.637 | Xanthomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Xanthomonas hortorum pv. vitians CFBP8639 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic |