INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PV036426 | Acutalibacteraceae phage NatCom_11578 | 58714 | 53.331 | Acutalibacteraceae | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Acutalibacteraceae | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PV036425 | Oscillospiraceae phage NatCom_11393 | 55567 | 50.991 | Oscillospiraceae | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Oscillospiraceae | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PV036424 | Coprococcus phage NatCom_10489 | 53340 | 43.519 | Coprococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Coprococcus sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PV036423 | phage NatCom_17901 | 57094 | 50.263 | Unspecified | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PV036422 | Agathobacter phage NatCom_13861 | 51943 | 46.050 | Agathobacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Agathobacter sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PV036421 | phage NatCom_9291 | 54681 | 40.886 | Unspecified | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | [Clostridium] innocuum | High-quality | High-quality | 100.000 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_61 |
| PV036420 | phage NatCom_9287 | 65040 | 51.461 | Unspecified | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PV036419 | Christensenellales phage NatCom_6392 | 53263 | 53.193 | Christensenellales | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Christensenellales | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PV036418 | Agathobacter phage NatCom_6238 | 53860 | 45.752 | Agathobacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Agathobacter sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PV036417 | Ruminococcus phage NatCom_3870 | 68260 | 37.934 | Ruminococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Ruminococcus sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | antirepressor orf_3;integrase orf_46 |