INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PV036446 | Faecalimonas phage NatCom_33527 | 54213 | 40.274 | Faecalimonas | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Faecalimonas sp. | High-quality | High-quality | 100.000 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_60 |
| PV036445 | Evtepia phage NatCom_42594 | 63373 | 52.740 | Evtepia | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Evtepia sp. 900546255 | High-quality | High-quality | 100.000 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_33 |
| PV036444 | Clostridium phage NatCom_42228 | 51876 | 52.807 | Clostridium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Clostridium sp. 003024715 | High-quality | High-quality | 100.000 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PV036443 | Dorea phage NatCom_31361 | 57124 | 44.470 | Dorea | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Dorea sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PV036442 | Coprococcus phage NatCom_29765 | 52530 | 46.191 | Coprococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Coprococcus sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PV036441 | Ruminococcus phage NatCom_29429 | 73915 | 39.409 | Ruminococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Ruminococcus sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PV036440 | Ruminococcus phage NatCom_28775 | 79525 | 37.495 | Ruminococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Ruminococcus sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_38;antirepressor orf_82 |
| PV036439 | Ruminococcus phage NatCom_28274 | 59194 | 38.810 | Ruminococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Ruminococcus sp. | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_9;antirepressor orf_56 |
| PV036438 | Oscillospiraceae phage NatCom_27610 | 49271 | 55.199 | Oscillospiraceae | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Oscillospiraceae | High-quality | High-quality | 100.000 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PV036437 | Blautia phage NatCom_27009 | 57558 | 39.280 | Blautia | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Heliusvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Blautia sp. | High-quality | High-quality | 100.000 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | antirepressor orf_4;integrase orf_60 |