INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PV864765 | Sinorhizobium phage AP-J-162 | 471510 | 47.131 | Sinorhizobium | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Sinorhizobium meliloti | Complete | High-quality | 100.000 | DTR (high-confidence) | temperate | antirepressor orf_375 | |||
| PV864764 | Klebsiella phage CP-p-KP-21072 | 170395 | 40.774 | Klebsiella | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae | High-quality | High-quality | 99.030 | AAI-based (high-confidence) | Marfavirus | Marfavirus F48 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PV864763 | Klebsiella phage CP-p-KP-21068 | 178944 | 41.723 | Klebsiella | Group I | Straboviridae | Unclassified | Unclassified | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae | Complete | High-quality | 100.000 | DTR (high-confidence) | Slopekvirus | Slopekvirus matisse | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PV864296 | Pseudomonas phage Henu_18-20N | 43087 | 62.207 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa Pa48c | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Phikmvvirus | Phikmvvirus ABTNL | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PV861715 | Pseudomonas phage vB_PaeP_GZMU_A1002 | 63770 | 60.282 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa | Complete | High-quality | 100.000 | DTR (high-confidence) | Kochitakasuvirus | Kochitakasuvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PV857777 | Escherichia phage Ec_O157kw | 167578 | 35.326 | Escherichia | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Escherichia sp. STEC O157 | High-quality | High-quality | 99.730 | AAI-based (high-confidence) | Tequatrovirus | Tequatrovirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PV854855 | Pseudomonas phage Juniper | 48380 | 52.311 | Pseudomonas | Group I | Bruynoghevirus | Bruynoghevirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa FDA-CDC-AR_0232 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| PV854854 | Pseudomonas phage Violet | 271592 | 36.746 | Pseudomonas | Group I | Phikzvirus | Phikzvirus | Unclassified | Chimalliviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa PAO1 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| PV854853 | Pseudomonas phage Sage | 280335 | 36.806 | Pseudomonas | Group I | Phikzvirus | Phikzvirus | Unclassified | Chimalliviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa FDA-CDC-AR_0268 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| PV854852 | Pseudomonas phage Rose | 37867 | 63.718 | Pseudomonas | Group I | Citexvirus | Citexvirus | Unclassified | Peduoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa FDA-CDC-AR_0230 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | cro orf_34;cro orf_37 |