INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
PV915880	Gordonia phage Kwobi	58482	68.127	Gordonia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Gordonia terrae 3612	High-quality	High-quality	99.550	AAI-based (high-confidence)	Kroosvirus	Kroosvirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
PV915879	Gordonia phage NoPickles	59701	51.334	Gordonia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Gordonia rubripertincta NRRL B-16540	High-quality	High-quality	98.540	AAI-based (high-confidence)	Tanisvirus	Tanisvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PV915878	Mycobacterium phage November	61517	67.287	Mycobacterium	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	100.000	AAI-based (high-confidence)	Amginevirus	Amginevirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_37;immunity orf_40;cro orf_41
PV915877	Mycobacterium phage Bern	58365	66.727	Mycobacterium	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	95.340	AAI-based (high-confidence)	Anayavirus	Anayavirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
PV915876	Gordonia phage CathyBurgh	75886	58.954	Gordonia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Gordonia terrae 3612	Complete	High-quality	100.000	DTR (high-confidence)	Montyvirus	Montyvirus flakey	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PV915875	Arthrobacter phage MiniMommy	43680	66.827	Arthrobacter	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Arthrobacter sulfureus ATCC 19098	High-quality	High-quality	98.920	AAI-based (high-confidence)	Hilgardvirus	Hilgardvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PV915874	Mycobacterium phage EGUnicorn	42003	66.474	Mycobacterium	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	98.030	AAI-based (high-confidence)	Charlievirus	Charlievirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_34;immunity orf_35
PV915873	Streptomyces phage Scheme	134433	50.016	Streptomyces	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Streptomyces lividans JI 1326	Complete	High-quality	100.000	DTR (high-confidence)	Samistivirus	Samistivirus peebs	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PV915872	Mycobacterium phage Kolhan	67387	68.964	Mycobacterium	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	99.730	AAI-based (high-confidence)	Rosebushvirus	Rosebushvirus rosebush	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PV915871	Mycobacterium phage Lea83	61105	67.346	Mycobacterium	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	99.570	AAI-based (high-confidence)	Keshuvirus	Keshuvirus shedlockholmes	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_41;immunity orf_44