INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PZ787534 | Stenotrophomonas phage SM-12 | 45181 | 52.150 | Stenotrophomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Stenotrophomonas maltophilia DMST 25614 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| PZ787533 | Acinetobacter phage AB-SW1 | 33917 | 39.774 | Acinetobacter | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Acinetobacter baumannii ATCC 19606 | High-quality | High-quality | 97.970 | AAI-based (high-confidence) | temperate | integrase orf_28 | |||
| PZ787532 | Pseudomonas phage PA-SW14 | 44543 | 52.150 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa ATCC 27853 | High-quality | High-quality | 98.280 | AAI-based (high-confidence) | lytic | ||||
| PZ787531 | Pseudomonas phage PA-SW12 | 266099 | 56.072 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa ATCC 27853 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| PZ787336 | Escherichia phage vB_Eco10_Ziv | 47147 | 46.546 | Escherichia | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Escherichia coli | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | Query is a new genus and species. You could try running again with if you larger distance | lytic | |
| PZ786719 | Pseudomonas phage S4b | 66401 | 55.660 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa (clinical isolate) | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Pbunavirus | Pbunavirus LS1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PZ786312 | Escherichia phage SF-E12 | 167830 | 37.702 | Escherichia | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Escherichia coli ATCC 35150 | High-quality | High-quality | 98.860 | AAI-based (high-confidence) | lytic | ||||
| PZ784640 | Vibrio phage vB_ValS-L9 | 44025 | 43.557 | Vibrio | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Vibrio alginolyticus L4 | High-quality | High-quality | 99.440 | AAI-based (medium-confidence) | lytic | ||||
| PZ782780 | Escherichia phage ECBR3 | 149021 | 37.537 | Escherichia | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Escherichia coli ATCC 25922 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| PZ769277 | Aeromonas phage SN-10 | 53255 | 51.939 | Aeromonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Aeromonas hydrophila NJ-35 | High-quality | High-quality | 99.810 | AAI-based (high-confidence) | New_genus | New_species | Query is a new genus and species. You could try running again with if you larger distance | lytic |