Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PV648004Vibrio phage JSF384536045.505VibrioUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Vibrio choleraeCompleteHigh-quality100.000DTR (high-confidence) GajwadongvirusGajwadongvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV646497Enterococcus phage CUB-FS14231035.858EnterococcusUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Enterococcus faecalis ATCC 51299High-qualityHigh-quality100.000AAI-based (high-confidence) KochikohdavirusKochikohdavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV646496Enterococcus phage CUB-FM1815334.474EnterococcusUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Enterococcus faeciumMedium-qualityGenome-fragment78.590AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PV644008Klebsiella phage WTZ14100853.004KlebsiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Klebsiella pneumoniaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) PrzondovirusPrzondovirus P560Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV641718Pseudomonas phage Atpa0016636662.399PseudomonasGroup I HollowayvirusHollowayvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PAO1kHigh-qualityHigh-quality100.000AAI-based (high-confidence) HollowayvirusHollowayvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_61
PV641625Pseudomonas phage Ps23.PMD4288053.762PseudomonasGroup I SeptimatrevirusSeptimatrevirusJondennisvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaCompleteHigh-quality100.000DTR (high-confidence) SeptimatrevirusSeptimatrevirus C1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV641624Pseudomonas phage Ps1.PMD4565752.614PseudomonasGroup I BruynoghevirusBruynoghevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaCompleteHigh-quality100.000DTR (high-confidence) BruynoghevirusBruynoghevirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV641623Staphylococcus phage St1.CM13642129.921StaphylococcusUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Staphylococcus aureusCompleteHigh-quality100.000DTR (high-confidence) SilviavirusSilviavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV641622Staphylococcus phage St14.GH14141430.798StaphylococcusUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Staphylococcus aureusCompleteHigh-quality100.000DTR (high-confidence) KayvirusKayvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PV641621Pseudomonas phage Ps23.FT4343062.047PseudomonasGroup I PhikmvvirusPhikmvvirusKrylovirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaCompleteHigh-quality100.000DTR (high-confidence) PhikmvvirusPhikmvvirus RLPCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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