INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Create interactive summaries of genome metadata and download the resulting figures.

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Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Host (NCBI)

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Genus (TaxMyPhage)

CheckV quality

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
PX283078	Pseudomonas phage IBEC_4	18872	51.272	Pseudomonas	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Pseudomonas aeruginosa (PAO1)	Low-quality	Genome-fragment	41.630	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	lytic
PX283077	Pseudomonas phage IBEC_3	89894	49.309	Pseudomonas	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Pseudomonas aeruginosa (PAO1)	Complete	High-quality	100.000	DTR (high-confidence)	Pakpunavirus	Pakpunavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PX283076	Pseudomonas phage IBEC_2	88941	49.247	Pseudomonas	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Pseudomonas aeruginosa (PAO1)	High-quality	High-quality	95.630	AAI-based (high-confidence)	Pakpunavirus	Pakpunavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PX283063	Klebsiella phage KPP-X1	146898	44.476	Klebsiella	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Klebsiella pneumoniae ATCC 700603	Complete	High-quality	100.000	DTR (high-confidence)	Mydovirus	Mydovirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
PX283057	Streptococcus phage YC-2	37789	39.395	Streptococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Streptococcus thermophilus	High-quality	High-quality	98.080	AAI-based (high-confidence)	Brussowvirus	Brussowvirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	antirepressor orf_36;cro orf_37
PX283056	Streptococcus phage 016-DG1	39574	38.730	Streptococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Streptococcus thermophilus	High-quality	High-quality	100.000	AAI-based (high-confidence)	Brussowvirus	Brussowvirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	cro orf_38
PX283055	Streptococcus phage XL-DG2	35137	38.515	Streptococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Streptococcus thermophilus	High-quality	High-quality	94.760	AAI-based (high-confidence)	Moineauvirus	Moineauvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_24;cro orf_25
PX283054	Streptococcus phage T7M4	35121	38.513	Streptococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Streptococcus thermophilus	High-quality	High-quality	94.710	AAI-based (high-confidence)	Moineauvirus	Moineauvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_24;cro orf_25
PX283053	Streptococcus phage T7M3	35121	38.515	Streptococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Streptococcus thermophilus	High-quality	High-quality	94.710	AAI-based (high-confidence)	Moineauvirus	Moineauvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_24;cro orf_25
PX283052	Streptococcus phage T7M2	35137	38.523	Streptococcus	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Streptococcus thermophilus	High-quality	High-quality	94.760	AAI-based (high-confidence)	Moineauvirus	Moineauvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_24;cro orf_25