INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PZ830933 | Salmonella phage P27 | 109099 | 39.113 | Salmonella | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Salmonella enterica subsp. enterica serovar Agona H3D6 | High-quality | High-quality | 96.570 | AAI-based (high-confidence) | lytic | ||||
| PZ825127 | Escherichia phage vB_EcoM_B47 | 36272 | 54.720 | Escherichia | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Escherichia coli | High-quality | High-quality | 91.800 | AAI-based (high-confidence) | lytic | ||||
| PZ824728 | Bacillus phage Bernard3 | 165545 | 37.801 | Bacillus | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Bacillus thuringiensis serovar kurstaki | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| PZ818516 | Salmonella phage SA215 | 39605 | 48.645 | Salmonella | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Salmonella enterica subsp. enterica serovar Typhimurium | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| PZ818515 | Salmonella phage PK069 | 39605 | 48.658 | Salmonella | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Salmonella enterica subsp. enterica serovar Typhimurium | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| PZ809441 | Bacillus phage APU1 | 153847 | 41.164 | Bacillus | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Bacillus sp. | High-quality | High-quality | 99.900 | AAI-based (high-confidence) | lytic | ||||
| PZ809294 | Salmonella phage SA281 | 39626 | 48.665 | Salmonella | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Salmonella enterica subsp. enterica serovar Typhimurium | Complete | High-quality | 100.000 | DTR (high-confidence) | Berlinvirus | Berlinvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PZ809289 | Escherichia phage 12-ed | 171455 | 39.494 | Escherichia | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Escherichia coli | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Dhakavirus | Dhakavirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PZ803323 | Enterococcus phage vB_EfsS_Lmqs38-1 | 150600 | 37.003 | Enterococcus | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Enterecoccus faecalis | High-quality | High-quality | 98.710 | AAI-based (high-confidence) | lytic | ||||
| PZ803322 | Enterococcus phage vB_EhiM_Lmqs47-1 | 17580 | 35.922 | Enterococcus | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Enterecoccus hirae | High-quality | High-quality | 95.090 | AAI-based (medium-confidence) | lytic |