Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PX585978Burkholderia phage vB_BgM-AB64470360.985BurkholderiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Burkholderia gladioli D1336High-qualityHigh-quality100.000AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_25;integrase orf_37
PX585977Burkholderia phage vB_BgM-AB43572264.966BurkholderiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Burkholderia gladioli D1336High-qualityHigh-quality97.730AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_39
PX585279Vibrio phage vB_ValP-R39Z7182437.733VibrioUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Vibrio alginolyticus ZS10High-qualityHigh-quality96.840AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PX585177Pseudomonas phage vB_PaeM_BonaDea27686836.853PseudomonasUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Pseudomonas aeruginosaHigh-qualityHigh-quality98.760AAI-based (high-confidence) PhikzvirusPhikzvirus phiKZCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_208
PX584507Salmonella phage vB_SaeS_BG-2P5667245.696SalmonellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Salmonella sp. BG9-2CompleteHigh-quality100.000DTR (high-confidence) RosemountvirusRosemountvirus BP63The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PX583559Pseudomonas phage PRL16200164.551PseudomonasUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Pseudomonas aeruginosa PAO1High-qualityHigh-quality100.000AAI-based (high-confidence) YuavirusYuavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX583296Escherichia phage SF-E316984037.601EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coli ATCC35150High-qualityHigh-quality100.000AAI-based (high-confidence) MosigvirusMosigvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX583170Escherichia phage vB-EcoM-Eg055626044.118EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coliCompleteHigh-quality100.000DTR (high-confidence) CarltongylesvirusCarltongylesvirus flopperCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX583164Vibrio phage vB_Vp_PvVp24315849.170VibrioUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Vibrio parahaemolyticusHigh-qualityHigh-quality99.510AAI-based (high-confidence) MaculvirusMaculvirus SrVc9Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX583110Pseudomonas phage CYPPA0166596657.089PseudomonasUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Pseudomonas aeruginosa CYPA003High-qualityHigh-quality99.880AAI-based (high-confidence) PbunavirusPbunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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