INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Explore INPHARED2 data visually

Create interactive summaries of genome metadata and download the resulting figures.

Open graphs

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Host (NCBI)

Family (NCBI)

Genus (TaxMyPhage)

CheckV quality

PhageLeads lifestyle

Rows

Clear

Choose fields for download

36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
PV987637	Burkholderia phage vB_SBP38	37395	65.062	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	99.710	AAI-based (high-confidence)	Tigrvirus	Tigrvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_11
PV987636	Burkholderia phage vB_SBP29	36696	64.612	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	98.650	AAI-based (high-confidence)	Duodecimduovirus	Duodecimduovirus phiE122	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PV987635	Burkholderia phage vB_SBP27	36750	65.224	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	98.060	AAI-based (high-confidence)	Tigrvirus	Tigrvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_12
PV987634	Burkholderia phage vB_SBP24	36696	64.617	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	98.650	AAI-based (high-confidence)	Duodecimduovirus	Duodecimduovirus phiE122	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PV987633	Burkholderia phage vB_SBP23	36696	64.612	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	98.650	AAI-based (high-confidence)	Duodecimduovirus	Duodecimduovirus phiE122	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PV987632	Burkholderia phage vB_SBP18	37474	65.064	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	99.920	AAI-based (high-confidence)	Tigrvirus	Tigrvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_11
PV987631	Burkholderia phage vB_SBP10b	36696	64.612	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	98.650	AAI-based (high-confidence)	Duodecimduovirus	Duodecimduovirus phiE122	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PV987630	Burkholderia phage vB_FUB47b	36418	64.534	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	97.900	AAI-based (high-confidence)	Duodecimduovirus	Duodecimduovirus phiE122	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
PV987629	Burkholderia phage vB_FUB41	36207	65.335	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	96.510	AAI-based (high-confidence)	Tigrvirus	Tigrvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_45
PV987628	Burkholderia phage vB_FUB33	36519	64.528	Burkholderia	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Burkholderia pseudomallei	High-quality	High-quality	98.160	AAI-based (high-confidence)	Duodecimduovirus	Duodecimduovirus phiE122	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic