Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MT104467Pseudomonas phage MR44481645.736PseudomonasGroup I GajwadongvirusGajwadongvirusUnclassifiedUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality99.260AAI-based (high-confidence) GajwadongvirusGajwadongvirus MR4Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT104466Pseudomonas phage MR24098657.576PseudomonasGroup I HennigervirusHennigervirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) HennigervirusHennigervirus MR2The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MT104465Pseudomonas phage MR13903356.165PseudomonasGroup I HennigervirusHennigervirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality95.960AAI-based (high-confidence) HennigervirusHennigervirus MR1The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MT104122Sporosarcina phage Lietuvens6451749.854SporosarcinaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Sporosarcina aquimarinaCompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_38
MT094431Pseudomonas phage BIM BV-463886056.413PseudomonasGroup I PifdecavirusPifdecavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas fluorescens BIM B-582CompleteHigh-quality100.000DTR (high-confidence) PifdecavirusPifdecavirus BIMBV46The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MT094430Pseudomonas phage BIM BV-454056558.146PseudomonasGroup I BifseptvirusBifseptvirusUnclassifiedAutonotataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas fluorescens BIM B-582CompleteHigh-quality100.000DTR (high-confidence) BifseptvirusBifseptvirus BIMBV45Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT090077Klebsiella phage CX14501353.882KlebsiellaGroup I DrulisvirusDrulisvirusSlopekvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae A106High-qualityHigh-quality100.000AAI-based (high-confidence) DrulisvirusDrulisvirus CX1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT084350Xylella phage Xfas533583956.868XylellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Xylella fastidiosa subsp. multiplex IVIA5901High-qualityHigh-quality99.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MT080603Staphylococcus phage vB_SauM_EW914195330.781StaphylococcusGroup I TwortvirinaeUnclassifiedTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus carnosus TM300High-qualityHigh-quality100.000AAI-based (high-confidence) KayvirusKayvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MT080602Staphylococcus phage vB_SauM_EW7413989630.435StaphylococcusGroup I KayvirusKayvirusTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus carnosus TM300High-qualityHigh-quality98.790AAI-based (high-confidence) KayvirusKayvirus kayCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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