INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MT234343	Agrobacterium phage OLIVR6	152004	46.942	Agrobacterium	Group I	Heverleevirus	Heverleevirus	Unclassified	Pootjesviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Rhizogenic Agrobacterium biovar 1 ST15.13/095	High-quality	High-quality	100.000	AAI-based (high-confidence)	Heverleevirus	Heverleevirus OLIVR5	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT234342	Agrobacterium phage OLIVR5	151073	46.936	Agrobacterium	Group I	Heverleevirus	Heverleevirus	Unclassified	Pootjesviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Rhizogenic Agrobacterium biovar 1 ST15.13/095	High-quality	High-quality	99.690	AAI-based (high-confidence)	Heverleevirus	Heverleevirus OLIVR5	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT234341	Agrobacterium phage OLIVR4	67981	51.722	Agrobacterium	Group I	Schmittlotzvirus	Schmittlotzvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Rhizogenic Agrobacterium biovar 1 ST15.13/040	High-quality	High-quality	99.240	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	lytic
MT234340	Agrobacterium phage OLIVR3	75576	45.386	Agrobacterium	Group I	Oliverunavirus	Oliverunavirus	Unclassified	Schitoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Rhizogenic Agrobacterium biovar 1 ST15.13/040	High-quality	High-quality	100.000	AAI-based (high-confidence)	Oliverunavirus	Oliverunavirus OLIVR1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT234339	Agrobacterium phage OLIVR2	75576	45.381	Agrobacterium	Group I	Oliverunavirus	Oliverunavirus	Unclassified	Schitoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Rhizogenic Agrobacterium biovar 1 ST15.13/040	High-quality	High-quality	100.000	AAI-based (high-confidence)	Oliverunavirus	Oliverunavirus OLIVR1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT234338	Agrobacterium phage OLIVR1	75576	45.389	Agrobacterium	Group I	Oliverunavirus	Oliverunavirus	Unclassified	Schitoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Rhizogenic Agrobacterium biovar 1 ST15.13/040	High-quality	High-quality	100.000	AAI-based (high-confidence)	Oliverunavirus	Oliverunavirus OLIVR1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT233524	Salmonella phage vB_Sen_I1	112111	38.993	Salmonella	Group I	Tequintavirus	Tequintavirus	Markadamsvirinae	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica	High-quality	High-quality	99.150	AAI-based (high-confidence)	Tequintavirus	Tequintavirus tvI1	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MT230534	Pantoea phage vB_PagM_SSEM1	54982	44.182	Pantoea	Group I	Loessnervirus	Loessnervirus	Cleopatravirinae	Chaseviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pantoea agglomerans strain SER	High-quality	High-quality	100.000	AAI-based (high-confidence)	Loessnervirus	Loessnervirus SSEM1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT227925	Vibrio phage phiV141	43313	48.170	Vibrio	Group I	Fujianvirus	Fujianvirus	Unclassified	Unclassified	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio alginolyticus	High-quality	High-quality	100.000	AAI-based (high-confidence)	Fujianvirus	Fujianvirus V141	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT227924	Vibrio phage phiV208	45521	43.160	Vibrio	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio alginolyticus	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	antirepressor orf_53