Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PZ533465Klebsiella phage Kleo4803448.693KlebsiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Klebsiella pneumonia KPI 1627High-qualityHigh-quality98.950AAI-based (high-confidence) SircambvirusSircambvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PZ531211Microbacterium phage Tyrellus1744568.747MicrobacteriumUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Microbacterium foliorum NRRL B-24224High-qualityHigh-quality100.000AAI-based (high-confidence) PaopuvirusPaopuvirus ScamanderCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ531210Microbacterium phage Sweetums3943969.984MicrobacteriumUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Microbacterium foliorum NRRL B-24224High-qualityHigh-quality99.520AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PZ531209Microbacterium phage SuperHands4798369.608MicrobacteriumUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Microbacterium foliorum NRRL B-24224High-qualityHigh-quality100.000AAI-based (high-confidence) PercivalvirusPercivalvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ531208Mycobacterium phage Reccee7013468.428MycobacteriumUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.910AAI-based (high-confidence) AcadianvirusAcadianvirus acadianCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ531207Microbacterium phage Picconator1744568.747MicrobacteriumUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Microbacterium foliorum NRRL B-24224High-qualityHigh-quality100.000AAI-based (high-confidence) PaopuvirusPaopuvirus ScamanderCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ531206Arthrobacter phage Pauu1561267.301ArthrobacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Arthrobacter globiformis NRRL B-24025High-qualityHigh-quality100.000AAI-based (high-confidence) CorgivirusCorgivirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ531205Mycobacterium phage Lucia5470061.108MycobacteriumUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality95.050AAI-based (high-confidence) CheoctovirusCheoctovirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_38;immunity orf_40;antirepressor orf_41
PZ531204Arthrobacter phage Jeremy4pt05419751.783ArthrobacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Arthrobacter globiformis B-2979High-qualityHigh-quality99.470AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PZ531203Arthrobacter phage Henrique4260564.945ArthrobacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Arthrobacter globiformis B-2979High-qualityHigh-quality98.760AAI-based (high-confidence) BridgettevirusBridgettevirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_35;integrase orf_37
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