INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MT613935	Pseudomonas phage Persinger	44033	62.860	Pseudomonas	Group I	Harrisonburgvirus	Harrisonburgvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa UVA4	High-quality	High-quality	100.000	AAI-based (high-confidence)	Harrisonburgvirus	Harrisonburgvirus persinger	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_43
MT612989	Vibrio phage vB_ValM_R11Z	246831	41.332	Vibrio	Group I	Schizotequatrovirus	Schizotequatrovirus	Unclassified	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio alginolyticus NBRC 15630 = ATCC 17749	High-quality	High-quality	92.650	AAI-based (high-confidence)	Schizotequatrovirus	Schizotequatrovirus vh7d	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT612988	Vibrio phage vB_ValM_R10Z	247167	41.295	Vibrio	Group I	Schizotequatrovirus	Schizotequatrovirus	Unclassified	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio alginolyticus NBRC 15630 = ATCC 17749	High-quality	High-quality	92.760	AAI-based (high-confidence)	Schizotequatrovirus	Schizotequatrovirus vh7d	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT611523	Escherichia phage DK-13	172275	40.178	Escherichia	Group I	Gaprivervirus	Gaprivervirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Gaprivervirus	Gaprivervirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT601274	Bacillus phage vB_BsuS-Goe13	126848	34.788	Bacillus	Group I	Spbetavirus	Spbetavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus subtilis Delta6	High-quality	High-quality	99.410	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_1;integrase orf_27;antirepressor orf_98
MT601273	Bacillus phage vB_BsuS-Goe12	124287	34.797	Bacillus	Group I	Spbetavirus	Spbetavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus subtilis Delta6	High-quality	High-quality	97.720	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_1;integrase orf_27
MT601272	Bacillus phage vB_BsuS-Goe11	126288	34.913	Bacillus	Group I	Spbetavirus	Spbetavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus subtilis Delta6	High-quality	High-quality	99.250	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_29
MT601271	Bacillus phage vB_BsuM-Goe10	149539	40.351	Bacillus	Group I	Okubovirus	Okubovirus	Spounavirinae	Herelleviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus subtilis Delta6	Complete	High-quality	100.000	DTR (high-confidence)	Okubovirus	Okubovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT601270	Bacillus phage vB_BsuM-Goe9	150961	40.355	Bacillus	Group I	Okubovirus	Okubovirus	Spounavirinae	Herelleviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus subtilis Delta6	Complete	High-quality	100.000	DTR (high-confidence)	Okubovirus	Okubovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT597419	Pseudomonas phage vB_PsyP_3MF5	41608	56.528	Pseudomonas	Group I	Warsawvirus	Warsawvirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas syringae isolate 3M	Complete	High-quality	100.000	DTR (high-confidence)	Warsawvirus	Warsawvirus wv3MF5	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic