INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MT723932	Mycobacterium phage Schnauzer	43700	66.256	Mycobacterium	Group I	Charlievirus	Charlievirus	Nclasvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	100.000	AAI-based (high-confidence)	Charlievirus	Charlievirus Pipsqueaks	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_36;immunity orf_37
MT720689	Vibrio phage XM1	37633	42.096	Vibrio	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio rotiferianus	High-quality	High-quality	97.120	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
MT713136	Aeromonas phage AP1	254490	40.333	Aeromonas	Group I	Ceceduovirus	Ceceduovirus	Emmerichvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Aeromonas hydrophila	High-quality	High-quality	100.000	AAI-based (high-confidence)	Ceceduovirus	Ceceduovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT711979	Streptomyces phage Endor2	48829	65.080	Streptomyces	Group I	Camvirus	Camvirus	Arquatrovirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces coelicolor M600	High-quality	High-quality	98.010	AAI-based (high-confidence)	Camvirus	Camvirus endor2	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	immunity orf_30;integrase orf_50
MT711978	Streptomyces phage Endor1	49395	65.790	Streptomyces	Group I	Camvirus	Camvirus	Arquatrovirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces coelicolor M600	High-quality	High-quality	99.130	AAI-based (high-confidence)	Camvirus	Camvirus endor1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	immunity orf_29;integrase orf_49
MT711977	Streptomyces phage Dagobah	47301	68.965	Streptomyces	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Streptomyces coelicolor M600	Complete	High-quality	100.000	DTR (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
MT711976	Streptomyces phage Coruscant	133697	48.387	Streptomyces	Group I	Coruscantvirus	Coruscantvirus	Boydwoodruffvirinae	Stanwilliamsviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces venezuelae ATCC 10712	Complete	High-quality	100.000	DTR (high-confidence)	Coruscantvirus	Coruscantvirus coruscant	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MT711975	Streptomyces phage Alderaan	34411	72.128	Streptomyces	Group I	Austintatiousvirus	Austintatiousvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces venezuelae ATCC 10712	High-quality	High-quality	94.120	AAI-based (high-confidence)	Austintatiousvirus	Austintatiousvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_3;cro orf_38
MT711890	Pseudomonas phage PlaquesPlease	41456	58.071	Pseudomonas	Group I	Waldovirus	Waldovirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas putida	Complete	High-quality	100.000	DTR (high-confidence)	Waldovirus	Waldovirus plaquesplease	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MT711889	Pseudomonas phage Waldo5	41195	57.728	Pseudomonas	Group I	Waldovirus	Waldovirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas putida	Complete	High-quality	100.000	DTR (high-confidence)	Waldovirus	Waldovirus waldo5	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic