Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PX131139Acinetobacter phage Quartz9039232.694AcinetobacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumannii LUH5538High-qualityHigh-quality96.430AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PX131138Acinetobacter phage Binio9502132.863AcinetobacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumannii MAR15-4076High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PX131137Acinetobacter phage Belisarius8981132.818AcinetobacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumannii NIPH190High-qualityHigh-quality95.800AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PX131005Klebsiella phage Cirta4162051.958KlebsiellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality97.100AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_33
PX131004Klebsiella phage Awras4454952.989KlebsiellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality99.150AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_29
PX131003Klebsiella phage Wancharis4480053.893KlebsiellaGroup I DrulisvirusDrulisvirusSlopekvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeCompleteHigh-quality100.000DTR (high-confidence) DrulisvirusDrulisvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX131002Klebsiella phage Ksemtina4494353.848KlebsiellaGroup I DrulisvirusDrulisvirusSlopekvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) DrulisvirusDrulisvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX131001Klebsiella phage Hogar7720944.152KlebsiellaGroup I EfbeekayvirusEfbeekayvirusWaldeevirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) EfbeekayvirusEfbeekayvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_1;cro orf_96
PX131000Klebsiella phage Tissira4397553.908KlebsiellaGroup I DrulisvirusDrulisvirusSlopekvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) DrulisvirusDrulisvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX130999Klebsiella phage Kettania7687144.005KlebsiellaGroup I EfbeekayvirusEfbeekayvirusWaldeevirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) EfbeekayvirusEfbeekayvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_1;cro orf_94
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