INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle
MW006479	Salmonella phage GEC_vB_N5	110015	39.251	Salmonella	Group I	Tequintavirus	Tequintavirus	Markadamsvirinae	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica Enteritidis SeE.3	High-quality	High-quality	97.360	AAI-based (high-confidence)	Tequintavirus	Tequintavirus N5	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MW006478	Salmonella phage GEC_vB_N3	109645	40.085	Salmonella	Group I	Epseptimavirus	Epseptimavirus	Markadamsvirinae	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica Enteritidis SeE.3	High-quality	High-quality	96.950	AAI-based (high-confidence)	Epseptimavirus	Epseptimavirus N3	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MW006477	Salmonella phage GEC_vB_MG	141829	46.187	Salmonella	Group I	Seunavirus	Seunavirus	Vequintavirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica Enteritidis SeE.3	High-quality	High-quality	96.060	AAI-based (high-confidence)	Seunavirus	Seunavirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MW006476	Salmonella phage GEC_vB_GOT	157200	44.894	Salmonella	Group I	Kuttervirus	Kuttervirus	Cvivirinae	Ackermannviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica Typhimurium SeT.4	High-quality	High-quality	99.470	AAI-based (high-confidence)	Kuttervirus	Kuttervirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW006475	Salmonella phage GEC_vB_BS	85840	39.014	Salmonella	Group I	Felixounavirus	Felixounavirus	Ounavirinae	Andersonviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica Typhimurium SeT.4	High-quality	High-quality	97.500	AAI-based (high-confidence)	Felixounavirus	Felixounavirus mushroom	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW006474	Salmonella phage GEC_vB_B1	87369	39.064	Salmonella	Group I	Felixounavirus	Felixounavirus	Ounavirinae	Andersonviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica Typhimurium SeT.6	High-quality	High-quality	99.240	AAI-based (high-confidence)	Felixounavirus	Felixounavirus mushroom	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW004545	Enterococcus phage EFGrNG	145199	37.327	Enterococcus	Group I	Schiekvirus	Schiekvirus	Brockvirinae	Herelleviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterococcus faecalis	High-quality	High-quality	95.160	AAI-based (high-confidence)	Schiekvirus	Schiekvirus Efgrng	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW004544	Enterococcus phage EFGrKN	147532	37.311	Enterococcus	Group I	Schiekvirus	Schiekvirus	Brockvirinae	Herelleviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Enterococcus faecalis	High-quality	High-quality	96.690	AAI-based (high-confidence)	Schiekvirus	Schiekvirus EFDG1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW001769	Pectobacterium phage phiPccP-1	40387	47.775	Pectobacterium	Group I	Unyawovirus	Unyawovirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pectobacterium odoriferum	Complete	High-quality	100.000	DTR (high-confidence)	Unyawovirus	Unyawovirus DUPPII	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW001214	Bacillus phage SP8	138741	40.297	Bacillus	Group I	Okubovirus	Okubovirus	Spounavirinae	Herelleviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus subtilis Marburg strain	High-quality	High-quality	94.890	AAI-based (high-confidence)	Okubovirus	Okubovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic