INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Explore INPHARED2 data visually

Create interactive summaries of genome metadata and download the resulting figures.

Open graphs

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Host (NCBI)

Family (NCBI)

Genus (TaxMyPhage)

CheckV quality

PhageLeads lifestyle

Rows

Clear

Choose fields for download

37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MW021758	Serratia phage vB_SmaM_Yaphecito	275554	46.764	Serratia	Group I	Moabitevirus	Moabitevirus	Unclassified	Chimalliviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Serratia marcescens	High-quality	High-quality	99.400	AAI-based (high-confidence)	Moabitevirus	Moabitevirus mv2050HW	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW021757	Salmonella phage Sajous1	157255	44.862	Salmonella	Group I	Kuttervirus	Kuttervirus	Cvivirinae	Ackermannviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica serovar Typhimurium LT2	High-quality	High-quality	99.510	AAI-based (high-confidence)	Kuttervirus	Kuttervirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW021756	Cronobacter phage vB_CsaM_SemperBestia	177494	44.679	Cronobacter	Group I	Pseudotevenvirus	Pseudotevenvirus	Unclassified	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Cronobacter sakazakii	High-quality	High-quality	99.670	AAI-based (high-confidence)	Pseudotevenvirus	Pseudotevenvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW021755	Serratia phage vB_SmaS_Serratianator	42052	45.967	Serratia	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Serratia marcescens	High-quality	High-quality	100.000	AAI-based (medium-confidence)	Bonzeevirus	Bonzeevirus ulliraptor	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW021754	Salmonella phage FrontPhageNews	157832	44.612	Salmonella	Group I	Kuttervirus	Kuttervirus	Cvivirinae	Ackermannviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica serovar Typhimurium	High-quality	High-quality	99.860	AAI-based (high-confidence)	Kuttervirus	Kuttervirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW021753	Salmonella phage AR2819	156899	44.968	Salmonella	Group I	Kuttervirus	Kuttervirus	Cvivirinae	Ackermannviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica serovar Typhimurium LT2	High-quality	High-quality	99.280	AAI-based (high-confidence)	Kuttervirus	Kuttervirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW021752	Klebsiella phage vB_KpnM_BovinicusUrsus	166829	39.587	Klebsiella	Group I	Jiaodavirus	Jiaodavirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	High-quality	High-quality	98.820	AAI-based (high-confidence)	Jiaodavirus	Jiaodavirus jd18	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW021751	Cronobacter phage vB_CsaM_Cronuts	177882	44.540	Cronobacter	Group I	Pseudotevenvirus	Pseudotevenvirus	Unclassified	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Cronobacter sakazakii	High-quality	High-quality	99.880	AAI-based (high-confidence)	Pseudotevenvirus	Pseudotevenvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW021750	Citrobacter phage vB_CfrD_Supreme284	49439	42.851	Citrobacter	Group I	Tlsvirus	Tlsvirus	Tempevirinae	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Citrobacter freundii	High-quality	High-quality	98.080	AAI-based (high-confidence)	Tlsvirus	Tlsvirus mishy	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_78
MW021749	Citrobacter phage vB_Cfr_Xman	178331	43.174	Citrobacter	Group I	Pseudotevenvirus	Pseudotevenvirus	Unclassified	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Citrobacter sp.	High-quality	High-quality	100.000	AAI-based (high-confidence)	Pseudotevenvirus	Pseudotevenvirus miller	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic