INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MW055902	Mycobacterium phage Camster	47149	67.229	Mycobacterium	Group I	Fishburnevirus	Fishburnevirus	Pclasvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	96.220	AAI-based (high-confidence)	Fishburnevirus	Fishburnevirus malithi	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_30;immunity orf_31;antirepressor orf_34
MW055901	Gordonia phage Bunker	45508	67.061	Gordonia	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	High-quality	High-quality	97.430	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_34;integrase orf_36
MW043865	Alteromonas phage vB_AmeP_R8W	48825	40.551	Alteromonas	Group I	Foturvirus	Foturvirus	Unclassified	Unclassified	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Alteromonas sp.	High-quality	High-quality	100.000	AAI-based (high-confidence)	Foturvirus	Foturvirus R8W	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW042812	Klebsiella phage 066134	40243	53.028	Klebsiella	Group I	Przondovirus	Przondovirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	Complete	High-quality	100.000	DTR (high-confidence)	Przondovirus	Przondovirus 066022	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW042811	Klebsiella phage 066121	40243	53.038	Klebsiella	Group I	Przondovirus	Przondovirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	Complete	High-quality	100.000	DTR (high-confidence)	Przondovirus	Przondovirus 066022	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW042810	Klebsiella phage 066059	40523	53.012	Klebsiella	Group I	Przondovirus	Przondovirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	Complete	High-quality	100.000	DTR (high-confidence)	Przondovirus	Przondovirus 066022	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW042809	Klebsiella phage 066058	40522	52.998	Klebsiella	Group I	Przondovirus	Przondovirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	Complete	High-quality	100.000	DTR (high-confidence)	Przondovirus	Przondovirus 066022	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW042808	Klebsiella phage 066056	40952	52.627	Klebsiella	Group I	Przondovirus	Przondovirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	Complete	High-quality	100.000	DTR (high-confidence)	Przondovirus	Przondovirus pv066056	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW042807	Klebsiella phage 066053	40185	52.870	Klebsiella	Group I	Przondovirus	Przondovirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	Complete	High-quality	100.000	DTR (high-confidence)	Przondovirus	Przondovirus pv066053	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW042806	Klebsiella phage 066046	39887	53.032	Klebsiella	Group I	Przondovirus	Przondovirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae	Complete	High-quality	100.000	DTR (high-confidence)	Przondovirus	Przondovirus 066046	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic