INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MW057856	Providencia phage PSTCR4	57214	36.886	Providencia	Group I	Craquatrovirus	Craquatrovirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Providencia stuartii	High-quality	High-quality	99.350	AAI-based (high-confidence)	Craquatrovirus	Craquatrovirus PSTCR4	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW057855	Providencia phage PSTCR3	39447	41.879	Providencia	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Providencia stuartii	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	temperate	antirepressor orf_29;cro orf_39
MW057854	Providencia phage PSTCR2	40200	42.271	Providencia	Group I	Solymavirus	Solymavirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Providencia stuartii	High-quality	High-quality	100.000	AAI-based (high-confidence)	Solymavirus	Solymavirus PSTCR2	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW057783	Campylobacter phage CJLB-4	48361	49.865	Campylobacter	Group I	Lambdavirus	Lambdavirus	Jacobvirinae	Zimmerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Campylobacter jejuni	High-quality	High-quality	100.000	AAI-based (high-confidence)	Lambdavirus	Lambdavirus lambda	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_28;cro orf_45;cro orf_46
MW056503	Acinetobacter virus fBenAci003	40556	39.230	Acinetobacter	Group I	Friunavirus	Friunavirus	Beijerinckvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii	Complete	High-quality	100.000	DTR (high-confidence)	Friunavirus	Friunavirus fBenAci003	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW056502	Acinetobacter virus fBenAci002	41953	39.218	Acinetobacter	Group I	Friunavirus	Friunavirus	Beijerinckvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii	Complete	High-quality	100.000	DTR (high-confidence)	Friunavirus	Friunavirus fBenAci002	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW056501	Acinetobacter virus fBenAci001	40535	39.238	Acinetobacter	Group I	Friunavirus	Friunavirus	Beijerinckvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii	Complete	High-quality	100.000	DTR (high-confidence)	Friunavirus	Friunavirus fBenAci001	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW055915	Mycobacterium phage Plumbus	54468	61.133	Mycobacterium	Group I	Cheoctovirus	Cheoctovirus	Gracegardnervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	94.530	AAI-based (high-confidence)	Cheoctovirus	Cheoctovirus plumbus	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_40;immunity orf_42;antirepressor orf_43
MW055914	Microbacterium phage Xitlalli	53929	60.205	Microbacterium	Group I	Tinytimothyvirus	Tinytimothyvirus	Eekayvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium foliorum NRRL B-24224	High-quality	High-quality	99.690	AAI-based (high-confidence)	Tinytimothyvirus	Tinytimothyvirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MW055913	Arthrobacter phage Wollypog	63364	59.158	Arthrobacter	Group I	Wollypogvirus	Wollypogvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Arthrobacter globiformis B-2979	High-quality	High-quality	100.000	AAI-based (high-confidence)	Wollypogvirus	Wollypogvirus wollypog	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic