INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MW291014	Streptomyces phage MindFlayer	130258	49.467	Streptomyces	Group I	Karimacvirus	Karimacvirus	Boydwoodruffvirinae	Stanwilliamsviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces mirabilis NRRL B-2400	Complete	High-quality	100.000	DTR (high-confidence)	Karimacvirus	Karimacvirus karimac	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW291013	Gordonia phage Mocha12	46221	66.628	Gordonia	Group I	Attisvirus	Attisvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	High-quality	High-quality	100.000	AAI-based (high-confidence)	Attisvirus	Attisvirus ebert	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_36;immunity orf_42
MW291012	Mycobacterium phage StephanieG	156080	64.734	Mycobacterium	Group I	Bixzunavirus	Bixzunavirus	Ceeclamvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	97.840	AAI-based (high-confidence)	Bixzunavirus	Bixzunavirus astraea	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW286268	Pseudomonas phage Strit	41373	58.081	Pseudomonas	Group I	Krylovirinae	Unclassified	Krylovirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas syringae GAW0113	High-quality	High-quality	99.510	AAI-based (high-confidence)	Bertilvirus	Bertilvirus bertil	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_28
MW286267	Pseudomonas phage Misse	41342	58.122	Pseudomonas	Group I	Krylovirinae	Unclassified	Krylovirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas syringae GAW0113	High-quality	High-quality	99.440	AAI-based (high-confidence)	Bertilvirus	Bertilvirus bertil	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_28
MW286266	Pseudomonas phage Bertil	41374	58.073	Pseudomonas	Group I	Bertilvirus	Bertilvirus	Unclassified	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas syringae GAW0113	High-quality	High-quality	99.510	AAI-based (high-confidence)	Bertilvirus	Bertilvirus bertil	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_28
MW286254	Staphylococcus phage TSP	17987	29.427	Staphylococcus	Group I	Rosenblumvirus	Rosenblumvirus	Rakietenvirinae	Rountreeviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Staphylococcus aureus	High-quality	High-quality	100.000	AAI-based (high-confidence)	Rosenblumvirus	Rosenblumvirus SCH1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW286157	Escherichia phage vB_EcoM-BECP11	165973	35.366	Escherichia	Group I	Tequatrovirus	Tequatrovirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli NCTC 12079	Complete	High-quality	100.000	DTR (high-confidence)	Tequatrovirus	Tequatrovirus sf23	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MW286156	Escherichia phage vB_EcoS-BECP10	47915	43.692	Escherichia	Group I	Rogunavirus	Rogunavirus	Rogunavirinae	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli NCTC 12079	Complete	High-quality	100.000	DTR (high-confidence)	Rogunavirus	Rogunavirus BECP10	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_40
MW281503	Bacillus phage Anthos	164822	37.750	Bacillus	Group I	Bequatrovirus	Bequatrovirus	Bastillevirinae	Herelleviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Bacillus thuringiensis subsp. kurstaki ATCC 33679	Complete	High-quality	100.000	DTR (high-confidence)	Bequatrovirus	Bequatrovirus troll	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic