INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MW413353 | Salmonella phage SPHG1 | 47119 | 46.143 | Salmonella | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella Typhimurium EG.SmT3 | Medium-quality | Genome-fragment | 89.550 | AAI-based (high-confidence) | Rosemountvirus | Rosemountvirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| MW411580 | Vibrio phage vB_VpaS_VP-RY-9 | 81604 | 45.751 | Vibrio | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio parahaemolyticus | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MW411578 | Salmonella phage SP_Thor | 107183 | 40.091 | Salmonella | Group I | Epseptimavirus | Epseptimavirus | Markadamsvirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella sp. sym26ys | High-quality | High-quality | 94.750 | AAI-based (high-confidence) | Epseptimavirus | Epseptimavirus thor | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| MW406976 | Pseudomonas phage HX1 | 43113 | 62.239 | Pseudomonas | Group I | Phikmvvirus | Phikmvvirus | Krylovirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Phikmvvirus | Phikmvvirus HX1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MW406975 | Pseudomonas phage MYY9 | 43005 | 62.207 | Pseudomonas | Group I | Phikmvvirus | Phikmvvirus | Krylovirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa | High-quality | High-quality | 99.850 | AAI-based (high-confidence) | Phikmvvirus | Phikmvvirus MYY9 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MW406974 | Pseudomonas phage TH15 | 65936 | 55.574 | Pseudomonas | Group I | Pbunavirus | Pbunavirus | Unclassified | Lindbergviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa | High-quality | High-quality | 99.830 | AAI-based (high-confidence) | Pbunavirus | Pbunavirus TH15 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MW398869 | Vibrio phage VPG01 | 120016 | 39.928 | Vibrio | Group I | Vipunavirus | Vipunavirus | Ermolyevavirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio parahaemolyticus FORC023 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Vipunavirus | Vipunavirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| MW394467 | Bacillus phage 268TH004 | 52834 | 42.452 | Bacillus | Group I | Gettysburgvirus | Gettysburgvirus | Unclassified | Ehrlichviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus subtilis | Complete | High-quality | 100.000 | DTR (high-confidence) | Gettysburgvirus | Gettysburgvirus gv268TH004 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MW394391 | Klebsiella phage vB_KpM_FBKp24 | 307210 | 45.131 | Klebsiella | Group I | Maaswegvirus | Maaswegvirus | Unclassified | Chimalliviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae K6592 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Maaswegvirus | Maaswegvirus Kp24 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MW394390 | Klebsiella phage vB_KpM_FBKp34 | 141376 | 36.026 | Klebsiella | Group I | Stephanstirmvirinae | Unclassified | Stephanstirmvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae K6453 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic |