Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MW435857Mycobacterium phage Hydro7115968.878MycobacteriumGroup I CoopervirusCoopervirusBclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) CoopervirusCoopervirus brownCNACurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW435856Streptomyces phage Werner5156665.698StreptomycesGroup I LikavirusLikavirusArquatrovirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptomyces lividans JI 1326High-qualityHigh-quality100.000AAI-based (high-confidence) LikavirusLikavirus wernerCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateimmunity orf_28;integrase orf_47
MW435855Mycobacterium phage OhShagHennessy7262358.875MycobacteriumGroup I BronvirusBronvirusLclasvirinaeVilmaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality96.060AAI-based (high-confidence) BronvirusBronvirus ohshaghennessyCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_34;cro orf_37
MW435854Mycobacterium phage Psycho6211065.347MycobacteriumGroup I KratiovirusKratiovirusWeiservirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.780AAI-based (high-confidence) KratiovirusKratiovirus larvaThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_37;immunity orf_39
MW435853Streptomyces phage MeganTheeKilla12815247.419StreptomycesGroup I GilsonvirusGilsonvirusLoccivirinaeStanwilliamsviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptomyces viridochromogenes DSM40736CompleteHigh-quality100.000DTR (high-confidence) GilsonvirusGilsonvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW435566Xanthomonas phage X24596661.269XanthomonasGroup I TsukubavirusTsukubavirusKantovirinaeAnamaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Xanthomonas oryzae pv. oryzaeHigh-qualityHigh-quality96.410AAI-based (high-confidence) TsukubavirusTsukubavirus x2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW430345Staphylococcus phage ZCSS113974331.775StaphylococcusGroup I SciuriunavirusSciuriunavirusTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus sciuriHigh-qualityHigh-quality100.000AAI-based (high-confidence) SciuriunavirusSciuriunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MW427215Salmonella phage vB_SpuS_NX2634657445.521SalmonellaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar PullorumCompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
MW423798Salmonella phage vB STyj5-111059239.873SalmonellaGroup I EpseptimavirusEpseptimavirusMarkadamsvirinaeDemerecviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar Typhimurium CMCC50115High-qualityHigh-quality97.780AAI-based (high-confidence) EpseptimavirusEpseptimavirus STyj51The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MW423797Salmonella phage vB Seyj1-18879538.733SalmonellaGroup I FelixounavirusFelixounavirusOunavirinaeAndersonviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar Paratyphi A CMCC50001High-qualityHigh-quality100.000AAI-based (high-confidence) FelixounavirusFelixounavirus fv1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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