Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PX246280Klebsiella phage vB_KpnM_KM117505041.879KlebsiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Klebsiella pneumoniae KM1High-qualityHigh-quality98.250AAI-based (high-confidence) SlopekvirusSlopekvirus eap3Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX246135Salmonella phage SA014341649.961SalmonellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Salmonella enterica subsp. enterica serovar EnteritidisCompleteHigh-quality100.000DTR (high-confidence) JerseyvirusJerseyvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX245886Pseudomonas phage vB_PaeP_PT604305862.218PseudomonasUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Pseudomonas aeruginosa PAO1High-qualityHigh-quality99.960AAI-based (high-confidence) PhikmvvirusPhikmvvirus S1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX245885Pseudomonas phage vB_PaeM_PT26608455.682PseudomonasUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Pseudomonas aeruginosa PAO1High-qualityHigh-quality100.000AAI-based (high-confidence) PbunavirusPbunavirus DP1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX245884Pseudomonas phage vB_PaeS_PT14279153.691PseudomonasUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Pseudomonas aeruginosa PAO1High-qualityHigh-quality99.940AAI-based (high-confidence) SeptimatrevirusSeptimatrevirus kakheti25Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX241559Salmonella phage GF044233250.009SalmonellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Salmonella enterica subsp. enterica serovar EnteritidisHigh-qualityHigh-quality98.700AAI-based (high-confidence) JerseyvirusJerseyvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX241558Klebsiella phage ZBNAB014993650.957KlebsiellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Klebsiella pneumoniaeCompleteHigh-quality100.000DTR (high-confidence) WebervirusWebervirus wv2811Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PX240981Brucella phage vB_BruS_wang3814042.509BrucellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Brucella anthropiCompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
PX240008Streptococcus phage ALQ-A3742939.258StreptococcusUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Streptococcus thermophilus ALQHigh-qualityHigh-quality97.710AAI-based (high-confidence) BrussowvirusBrussowvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperatecro orf_30
PX237226Salmonella phage GSP0604176351.119SalmonellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Salmonella enterica subsp. enterica serovar Enteritidis SE006CompleteHigh-quality100.000DTR (high-confidence) CornellvirusCornellvirus ZSCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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