INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MW689258 | Hafnia phage Pocis76 | 48795 | 44.867 | Hafnia | Group I | Pocisvirus | Pocisvirus | Tempevirinae | Drexlerviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Hafnia sp. | High-quality | High-quality | 96.200 | AAI-based (high-confidence) | Pocisvirus | Pocisvirus pocis76 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MW679410 | Escherichia phage C6 | 169530 | 39.569 | Escherichia | Group I | Dhakavirus | Dhakavirus | Tevenvirinae | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli 22 | High-quality | High-quality | 99.740 | AAI-based (high-confidence) | Dhakavirus | Dhakavirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MW679027 | Clostridium phage cpx | 17538 | 34.468 | Clostridium | Group I | Brucesealvirus | Brucesealvirus | Unclassified | Guelinviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Clostridium perfringens S13 | High-quality | High-quality | 96.620 | AAI-based (high-confidence) | Brucesealvirus | Brucesealvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MW679026 | Eggerthella phage LE2-3 | 111961 | 62.969 | Eggerthella | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Eggerthella lenta DSM 2243 | High-quality | High-quality | 94.460 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MW679025 | Eggerthella phage LE1-1 | 15977 | 55.755 | Eggerthella | Group I | Guelinviridae | Unclassified | Unclassified | Guelinviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Eggerthella lenta DSM 2243 | Medium-quality | Genome-fragment | 72.230 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MW677529 | Rhodobacter phage RcZahn | 101599 | 60.715 | Rhodobacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Rhodobacter capsulatus YW1 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MW677528 | Rhodobacter phage RcWaterboi | 38301 | 64.823 | Rhodobacter | Group I | Rcapmuvirus | Rcapmuvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Rhodobacter capsulatus YW1 | High-quality | High-quality | 98.810 | AAI-based (high-confidence) | Rcapmuvirus | Rcapmuvirus waterboi | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_12 |
| MW677527 | Rhodobacter phage RcTiptonus | 94091 | 57.872 | Rhodobacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Rhodobacter capsulatus YW1 | High-quality | High-quality | 99.720 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MW677526 | Rhodobacter phage RcThunderbird | 43941 | 54.801 | Rhodobacter | Group I | Titanvirus | Titanvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Rhodobacter capsulatus YW1 | High-quality | High-quality | 99.310 | AAI-based (high-confidence) | Titanvirus | Titanvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MW677525 | Rhodobacter phage RcSimone-Hastad | 63102 | 60.749 | Rhodobacter | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Rhodobacter capsulatus SB1003 | Complete | High-quality | 100.000 | DTR (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic |