INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MZ447863 | Microcystis phage Mea-Yong924-1 | 40325 | 48.317 | Microcystis | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Microcystis sp. | Medium-quality | Genome-fragment | 88.820 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_54 |
| MZ447858 | Vibrio phage BUCT194 | 73099 | 38.477 | Vibrio | Group I | Varunavirus | Varunavirus | Unclassified | Schitoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Vibrio alginolyticus 1651 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Varunavirus | Varunavirus BUCT194 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MZ444140 | Pseudomonas phage PA7 | 282378 | 36.818 | Pseudomonas | Group I | Phikzvirus | Phikzvirus | Unclassified | Chimalliviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | Complete | High-quality | 100.000 | DTR (high-confidence) | Phikzvirus | Phikzvirus SL2 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MZ443789 | Erwinia phage pEa_SNUABM_36 | 261689 | 49.168 | Erwinia | Group I | Alexandravirus | Alexandravirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia amylovora | High-quality | High-quality | 98.760 | AAI-based (high-confidence) | Alexandravirus | Alexandravirus SNUABM35 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_204 |
| MZ443788 | Erwinia phage pEa_SNUABM_35 | 261719 | 49.167 | Erwinia | Group I | Alexandravirus | Alexandravirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia amylovora | High-quality | High-quality | 98.770 | AAI-based (high-confidence) | Alexandravirus | Alexandravirus SNUABM35 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_204 |
| MZ443787 | Erwinia phage pEa_SNUABM_39 | 265365 | 49.369 | Erwinia | Group I | Alexandravirus | Alexandravirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia amylovora | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Alexandravirus | Alexandravirus SNUABM2 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MZ443786 | Erwinia phage pEa_SNUABM_2 | 265442 | 49.379 | Erwinia | Group I | Alexandravirus | Alexandravirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia amylovora | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Alexandravirus | Alexandravirus SNUABM2 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MZ443785 | Erwinia phage pEa_SNUABM_22 | 265146 | 49.569 | Erwinia | Group I | Alexandravirus | Alexandravirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia amylovora | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Alexandravirus | Alexandravirus SNUABM22 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_334 |
| MZ443784 | Erwinia phage pEa_SNUABM_18 | 265970 | 49.565 | Erwinia | Group I | Alexandravirus | Alexandravirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia amylovora | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Alexandravirus | Alexandravirus SNUABM16 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_331 |
| MZ443783 | Erwinia phage pEa_SNUABM_28 | 267143 | 49.541 | Erwinia | Group I | Alexandravirus | Alexandravirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia amylovora | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Alexandravirus | Alexandravirus SNUABM16 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic |