INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MZ634340 | Klebsiella phage PWKp3 | 44626 | 53.464 | Klebsiella | Group I | Drulisvirus | Drulisvirus | Slopekvirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae | Complete | High-quality | 100.000 | DTR (high-confidence) | Drulisvirus | Drulisvirus PWKp1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MZ634339 | Klebsiella phage PWKp2 | 44612 | 53.557 | Klebsiella | Group I | Drulisvirus | Drulisvirus | Slopekvirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae | Complete | High-quality | 100.000 | DTR (high-confidence) | Drulisvirus | Drulisvirus PWKp1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MZ634338 | Klebsiella phage PWKp1 | 44602 | 53.538 | Klebsiella | Group I | Drulisvirus | Drulisvirus | Slopekvirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Drulisvirus | Drulisvirus PWKp1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MZ622713 | Vibrio phage phiKT1019 | 238840 | 43.487 | Vibrio | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Vibrio parahaemolyticus | Complete | High-quality | 100.000 | DTR (high-confidence) | New_genus | New_species | Query is a new genus and species. You could try running again with if you larger distance | lytic | |
| MZ622180 | Microbacterium phage Lola20 | 17388 | 68.634 | Microbacterium | Group I | Paopuvirus | Paopuvirus | Pelczarvirinae | Orlajensenviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Microbacterium foliorum NRRL B-24224 | High-quality | High-quality | 99.930 | AAI-based (high-confidence) | Paopuvirus | Paopuvirus azizam | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MZ622178 | Gordonia phage Tracker | 66607 | 65.903 | Gordonia | Group I | Foxborovirus | Foxborovirus | Emilbogenvirinae | Zierdtviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | High-quality | High-quality | 99.610 | AAI-based (high-confidence) | Foxborovirus | Foxborovirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MZ622175 | Microbacterium phage Juicer | 41099 | 62.766 | Microbacterium | Group I | Neferthenavirus | Neferthenavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Microbacterium foliorum NRRL B-24224 SEA | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| MZ622174 | Mycobacterium phage Sarma624 | 54312 | 61.463 | Mycobacterium | Group I | Cheoctovirus | Cheoctovirus | Gracegardnervirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 94.270 | AAI-based (high-confidence) | New_genus | New_species | Query is a new genus and species. You could try running again with if you larger distance | temperate | integrase orf_36;immunity orf_38;antirepressor orf_40 |
| MZ622172 | Mycobacterium phage Giraffe | 68869 | 66.449 | Mycobacterium | Group I | Pegunavirus | Pegunavirus | Bclasvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 99.130 | AAI-based (high-confidence) | Pegunavirus | Pegunavirus Pg1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MZ622170 | Microbacterium phage Blett | 38630 | 68.002 | Microbacterium | Group I | Appavirus | Appavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Microbacterium foliorum NRRL B-24224 | High-quality | High-quality | 99.700 | AAI-based (high-confidence) | Appavirus | Appavirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_9 |