Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MZ669808Enterobacter phage Phc5249448.566EnterobacterGroup I EclunavirusEclunavirusUnclassifiedDrexlerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterobacter hormaecheiCompleteHigh-quality100.000DTR (high-confidence) EclunavirusEclunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ666966Xanthomonas phage N14115261.951XanthomonasGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Xanthomonas oryzae pv. oryzaeCompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MZ666965Xanthomonas phage N33845461.840XanthomonasGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Xanthomonas oryzae pv. oryzaeHigh-qualityHigh-quality96.700AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MZ666939Lokiarchaeota virus WyrdV11557028.304LokiarchaeotaUnclassified FuselloviridaeUnclassifiedUnclassifiedFuselloviridaeUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Candidatus Lokiarchaeota archaeon 6Rcc_78Not-determinedGenome-fragment New_genusNew_speciesNo hits were found with the default settingslytic
MZ666938Desulfovibrio phage ProddE4263751.387DesulfovibrioGroup I ProddevirusProddevirusUnclassifiedUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Desulfovibrio desulfuricans strain EdelweissHigh-qualityHigh-quality100.000AAI-based (high-confidence) ProddevirusProddevirus proddECurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_6;antirepressor orf_13
MZ666130Enterococcus phage Bp294101434.988EnterococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterococcus faeciumCompleteHigh-quality100.000DTR (high-confidence) DelfunavirusDelfunavirus delf1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ648215Escherichia phage vB_EcoP_IMEP243957749.938EscherichiaGroup I KayfunavirusKayfunavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliCompleteHigh-quality100.000DTR (high-confidence) KayfunavirusKayfunavirus IMEP24The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
MZ648214Escherichia phage vB_EcoP_IMEP87580942.103EscherichiaGroup I KuravirusKuravirusGordonclarkvirinaeMtkvariviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliCompleteHigh-quality100.000DTR (high-confidence) KuravirusKuravirus IMEP8Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ648041Mycobacterium phage DaddyDaniels6874366.381MycobacteriumGroup I PegunavirusPegunavirusBclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.940AAI-based (high-confidence) PegunavirusPegunavirus Pg1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MZ648040Streptomyces phage Triste5156865.688StreptomycesGroup I LikavirusLikavirusArquatrovirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptomyces lividans JI 1326High-qualityHigh-quality100.000AAI-based (high-confidence) LikavirusLikavirus wernerCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateimmunity orf_27;integrase orf_47
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